Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC11.18□□□□□ -0.62
CMC4P56277 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 AC126335.2-201ENST00000623362 4637 ntBASIC11.18□□□□□ -0.62
CMC4P56277 SALL4P5-201ENST00000419001 1760 ntBASIC11.18□□□□□ -0.62
CMC4P56277 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
CMC4P56277 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC11.18□□□□□ -0.62
CMC4P56277 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
CMC4P56277 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC11.18□□□□□ -0.62
CMC4P56277 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
CMC4P56277 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC11.18□□□□□ -0.62
CMC4P56277 TMEM14DP-201ENST00000422205 345 ntBASIC11.18□□□□□ -0.62
CMC4P56277 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC11.18□□□□□ -0.62
CMC4P56277 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC11.18□□□□□ -0.62
CMC4P56277 U91328.1-201ENST00000437528 223 ntBASIC11.18□□□□□ -0.62
CMC4P56277 ATP5G2P4-201ENST00000442175 420 ntBASIC11.18□□□□□ -0.62
CMC4P56277 AL355994.2-201ENST00000447882 704 ntBASIC11.18□□□□□ -0.62
CMC4P56277 HOMER2P2-201ENST00000451621 847 ntBASIC11.18□□□□□ -0.62
CMC4P56277 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC11.18□□□□□ -0.62
CMC4P56277 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC11.18□□□□□ -0.62
CMC4P56277 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC11.18□□□□□ -0.62
CMC4P56277 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC11.18□□□□□ -0.62
CMC4P56277 VPS18-202ENST00000558474 873 ntTSL 3 BASIC11.18□□□□□ -0.62
CMC4P56277 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 GNRHR2-203ENST00000581100 1187 ntBASIC11.18□□□□□ -0.62
CMC4P56277 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC11.18□□□□□ -0.62
CMC4P56277 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC11.18□□□□□ -0.62
CMC4P56277 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
CMC4P56277 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
CMC4P56277 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC11.18□□□□□ -0.62
CMC4P56277 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC11.18□□□□□ -0.62
CMC4P56277 GPI-205ENST00000586425 1799 ntTSL 5 BASIC11.18□□□□□ -0.62
CMC4P56277 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC11.18□□□□□ -0.62
CMC4P56277 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
CMC4P56277 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC11.18□□□□□ -0.62
CMC4P56277 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC11.18□□□□□ -0.62
CMC4P56277 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CMC4P56277 MSTO2P-201ENST00000314835 1709 ntBASIC11.18□□□□□ -0.62
CMC4P56277 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC11.18□□□□□ -0.62
CMC4P56277 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 AL157414.3-201ENST00000624276 1954 ntBASIC11.17□□□□□ -0.62
CMC4P56277 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
CMC4P56277 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC11.17□□□□□ -0.62
CMC4P56277 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC11.17□□□□□ -0.62
CMC4P56277 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC11.17□□□□□ -0.62
CMC4P56277 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
CMC4P56277 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
CMC4P56277 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
CMC4P56277 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC11.17□□□□□ -0.62
CMC4P56277 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 OR2I1P-208ENST00000641137 4948 ntBASIC11.17□□□□□ -0.62
CMC4P56277 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
CMC4P56277 FES-204ENST00000414248 2327 ntTSL 2 BASIC11.17□□□□□ -0.62
CMC4P56277 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC11.17□□□□□ -0.62
CMC4P56277 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC11.17□□□□□ -0.62
CMC4P56277 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms