Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPB2P35606 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COPB2P35606 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.11■□□□□ 0.33
COPB2P35606 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.11■□□□□ 0.33
COPB2P35606 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPB2P35606 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.11■□□□□ 0.33
COPB2P35606 E2F3P2-201ENST00000447755 1422 ntBASIC17.11■□□□□ 0.33
COPB2P35606 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPB2P35606 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.11■□□□□ 0.33
COPB2P35606 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
COPB2P35606 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPB2P35606 AC009093.2-202ENST00000620513 2079 ntBASIC17.11■□□□□ 0.33
COPB2P35606 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPB2P35606 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.11■□□□□ 0.33
COPB2P35606 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COPB2P35606 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.11■□□□□ 0.33
COPB2P35606 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPB2P35606 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.1■□□□□ 0.33
COPB2P35606 AL157791.1-201ENST00000553667 1699 ntBASIC17.1■□□□□ 0.33
COPB2P35606 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPB2P35606 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPB2P35606 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPB2P35606 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COPB2P35606 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
COPB2P35606 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COPB2P35606 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPB2P35606 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
COPB2P35606 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPB2P35606 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
COPB2P35606 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.1■□□□□ 0.33
COPB2P35606 AC007274.2-201ENST00000421675 662 ntBASIC17.1■□□□□ 0.33
COPB2P35606 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.1■□□□□ 0.33
COPB2P35606 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.1■□□□□ 0.33
COPB2P35606 AL353637.1-201ENST00000451571 732 ntBASIC17.1■□□□□ 0.33
COPB2P35606 RPL18P13-201ENST00000478088 569 ntBASIC17.1■□□□□ 0.33
COPB2P35606 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COPB2P35606 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.1■□□□□ 0.33
COPB2P35606 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COPB2P35606 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.1■□□□□ 0.33
COPB2P35606 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
COPB2P35606 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.1■□□□□ 0.33
COPB2P35606 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
COPB2P35606 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.1■□□□□ 0.33
COPB2P35606 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPB2P35606 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
COPB2P35606 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
COPB2P35606 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.1■□□□□ 0.33
COPB2P35606 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.1■□□□□ 0.33
COPB2P35606 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.1■□□□□ 0.33
COPB2P35606 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
COPB2P35606 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.1■□□□□ 0.33
COPB2P35606 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPB2P35606 INE2-201ENST00000630399 1874 ntBASIC17.1■□□□□ 0.33
COPB2P35606 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
COPB2P35606 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPB2P35606 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
COPB2P35606 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPB2P35606 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
COPB2P35606 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COPB2P35606 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
COPB2P35606 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
COPB2P35606 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPB2P35606 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.09■□□□□ 0.33
COPB2P35606 RN7SKP214-201ENST00000364208 315 ntBASIC17.09■□□□□ 0.33
COPB2P35606 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.09■□□□□ 0.33
COPB2P35606 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.09■□□□□ 0.33
COPB2P35606 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.09■□□□□ 0.33
COPB2P35606 NUP210P1-202ENST00000504322 710 ntBASIC17.09■□□□□ 0.33
COPB2P35606 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.09■□□□□ 0.33
COPB2P35606 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.09■□□□□ 0.33
COPB2P35606 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.09■□□□□ 0.33
COPB2P35606 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.09■□□□□ 0.33
COPB2P35606 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.09■□□□□ 0.33
COPB2P35606 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.09■□□□□ 0.33
COPB2P35606 SNORD3B-2-202ENST00000571722 791 ntBASIC17.09■□□□□ 0.33
COPB2P35606 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.09■□□□□ 0.33
COPB2P35606 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.09■□□□□ 0.33
COPB2P35606 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPB2P35606 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPB2P35606 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
COPB2P35606 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COPB2P35606 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.09■□□□□ 0.33
COPB2P35606 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPB2P35606 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.09■□□□□ 0.33
COPB2P35606 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPB2P35606 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.09■□□□□ 0.33
COPB2P35606 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.09■□□□□ 0.33
COPB2P35606 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPB2P35606 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COPB2P35606 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COPB2P35606 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COPB2P35606 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
COPB2P35606 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
COPB2P35606 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
COPB2P35606 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.08■□□□□ 0.33
COPB2P35606 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
COPB2P35606 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
COPB2P35606 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.08■□□□□ 0.33
COPB2P35606 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
COPB2P35606 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms