Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCN1P31025 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCN1P31025 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCN1P31025 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCN1P31025 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.97□□□□□ -0.17
LCN1P31025 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LCN1P31025 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.97□□□□□ -0.17
LCN1P31025 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCN1P31025 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LCN1P31025 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LCN1P31025 RNU1-114P-201ENST00000365297 166 ntBASIC13.97□□□□□ -0.17
LCN1P31025 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LCN1P31025 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LCN1P31025 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LCN1P31025 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LCN1P31025 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LCN1P31025 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCN1P31025 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LCN1P31025 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.97□□□□□ -0.17
LCN1P31025 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.97□□□□□ -0.17
LCN1P31025 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.97□□□□□ -0.17
LCN1P31025 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.97□□□□□ -0.17
LCN1P31025 PTP4A1P2-201ENST00000546033 454 ntBASIC13.97□□□□□ -0.17
LCN1P31025 WASH4P-201ENST00000564273 1246 ntBASIC13.97□□□□□ -0.17
LCN1P31025 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.97□□□□□ -0.17
LCN1P31025 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCN1P31025 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCN1P31025 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCN1P31025 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LCN1P31025 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LCN1P31025 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCN1P31025 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.97□□□□□ -0.17
LCN1P31025 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCN1P31025 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCN1P31025 CICP23-201ENST00000605013 2741 ntBASIC13.97□□□□□ -0.17
LCN1P31025 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LCN1P31025 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.97□□□□□ -0.17
LCN1P31025 AL137784.3-201ENST00000623858 2288 ntBASIC13.97□□□□□ -0.17
LCN1P31025 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCN1P31025 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
LCN1P31025 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.96□□□□□ -0.17
LCN1P31025 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.96□□□□□ -0.17
LCN1P31025 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P31025 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.96□□□□□ -0.17
LCN1P31025 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.96□□□□□ -0.17
LCN1P31025 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.96□□□□□ -0.17
LCN1P31025 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.96□□□□□ -0.17
LCN1P31025 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.96□□□□□ -0.17
LCN1P31025 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P31025 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P31025 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P31025 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.96□□□□□ -0.17
LCN1P31025 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P31025 KRT8P35-201ENST00000483942 1338 ntBASIC13.96□□□□□ -0.17
LCN1P31025 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P31025 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P31025 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P31025 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P31025 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.96□□□□□ -0.17
LCN1P31025 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
LCN1P31025 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.96□□□□□ -0.17
LCN1P31025 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.96□□□□□ -0.17
LCN1P31025 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P31025 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P31025 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LCN1P31025 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P31025 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P31025 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P31025 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P31025 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P31025 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P31025 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.96□□□□□ -0.17
LCN1P31025 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P31025 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P31025 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.96□□□□□ -0.17
LCN1P31025 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P31025 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.96□□□□□ -0.17
LCN1P31025 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.96□□□□□ -0.17
LCN1P31025 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P31025 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
LCN1P31025 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LCN1P31025 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
LCN1P31025 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
LCN1P31025 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.96□□□□□ -0.17
LCN1P31025 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.96□□□□□ -0.17
LCN1P31025 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.96□□□□□ -0.17
LCN1P31025 AC093433.1-201ENST00000458048 571 ntBASIC13.96□□□□□ -0.17
LCN1P31025 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.96□□□□□ -0.17
LCN1P31025 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LCN1P31025 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.96□□□□□ -0.17
LCN1P31025 AC015936.2-201ENST00000593177 259 ntBASIC13.96□□□□□ -0.17
LCN1P31025 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
LCN1P31025 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LCN1P31025 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P31025 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.96□□□□□ -0.17
LCN1P31025 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.96□□□□□ -0.17
LCN1P31025 PTENP1-202ENST00000532280 3996 ntBASIC13.96□□□□□ -0.17
LCN1P31025 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P31025 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P31025 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms