Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.29□□□□□ -0.12
CCNA2P20248 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.29□□□□□ -0.12
CCNA2P20248 AC136604.1-201ENST00000418535 575 ntBASIC14.29□□□□□ -0.12
CCNA2P20248 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.29□□□□□ -0.12
CCNA2P20248 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCNA2P20248 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.29□□□□□ -0.12
CCNA2P20248 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCNA2P20248 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.29□□□□□ -0.12
CCNA2P20248 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.29□□□□□ -0.12
CCNA2P20248 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.29□□□□□ -0.12
CCNA2P20248 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCNA2P20248 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCNA2P20248 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
CCNA2P20248 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCNA2P20248 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CCNA2P20248 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCNA2P20248 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCNA2P20248 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCNA2P20248 AC100757.3-201ENST00000622361 1406 ntBASIC14.29□□□□□ -0.12
CCNA2P20248 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCNA2P20248 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.29□□□□□ -0.12
CCNA2P20248 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCNA2P20248 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCNA2P20248 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.29□□□□□ -0.12
CCNA2P20248 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.29□□□□□ -0.12
CCNA2P20248 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.29□□□□□ -0.12
CCNA2P20248 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
CCNA2P20248 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.29□□□□□ -0.12
CCNA2P20248 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCNA2P20248 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCNA2P20248 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CCNA2P20248 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
CCNA2P20248 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCNA2P20248 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCNA2P20248 AC152010.1-201ENST00000415779 2006 ntBASIC14.29□□□□□ -0.12
CCNA2P20248 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.29□□□□□ -0.12
CCNA2P20248 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCNA2P20248 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CCNA2P20248 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCNA2P20248 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCNA2P20248 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCNA2P20248 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.29□□□□□ -0.12
CCNA2P20248 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CCNA2P20248 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNA2P20248 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CCNA2P20248 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNA2P20248 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNA2P20248 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNA2P20248 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNA2P20248 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNA2P20248 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNA2P20248 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNA2P20248 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNA2P20248 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNA2P20248 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNA2P20248 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNA2P20248 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.28□□□□□ -0.12
CCNA2P20248 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNA2P20248 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNA2P20248 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCNA2P20248 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.28□□□□□ -0.12
CCNA2P20248 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNA2P20248 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.28□□□□□ -0.12
CCNA2P20248 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.28□□□□□ -0.12
CCNA2P20248 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.28□□□□□ -0.12
CCNA2P20248 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCNA2P20248 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCNA2P20248 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.28□□□□□ -0.12
CCNA2P20248 AC113367.3-201ENST00000508316 1912 ntBASIC14.28□□□□□ -0.12
CCNA2P20248 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.28□□□□□ -0.12
CCNA2P20248 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCNA2P20248 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.28□□□□□ -0.12
CCNA2P20248 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.28□□□□□ -0.12
CCNA2P20248 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.28□□□□□ -0.12
CCNA2P20248 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.28□□□□□ -0.12
CCNA2P20248 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CCNA2P20248 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.28□□□□□ -0.12
CCNA2P20248 AC044860.1-202ENST00000559481 777 ntBASIC14.28□□□□□ -0.12
CCNA2P20248 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.28□□□□□ -0.12
CCNA2P20248 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.28□□□□□ -0.12
CCNA2P20248 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCNA2P20248 AC015911.4-201ENST00000588022 1070 ntBASIC14.28□□□□□ -0.12
CCNA2P20248 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNA2P20248 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CCNA2P20248 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.28□□□□□ -0.12
CCNA2P20248 AF228730.6-201ENST00000641497 218 ntBASIC14.28□□□□□ -0.12
CCNA2P20248 AC084121.3-201ENST00000641716 218 ntBASIC14.28□□□□□ -0.12
CCNA2P20248 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CCNA2P20248 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CCNA2P20248 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.28□□□□□ -0.12
CCNA2P20248 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
CCNA2P20248 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNA2P20248 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNA2P20248 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.28□□□□□ -0.12
CCNA2P20248 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCNA2P20248 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNA2P20248 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNA2P20248 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.28□□□□□ -0.12
CCNA2P20248 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCNA2P20248 MST1P2-201ENST00000457982 2291 ntBASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms