Protein–RNA interactions for Protein: P05023

ATP1A1, Sodium/potassium-transporting ATPase subunit alpha-1, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1P05023 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.05■□□□□ 0.16
ATP1A1P05023 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP1A1P05023 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.05■□□□□ 0.16
ATP1A1P05023 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP1A1P05023 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP1A1P05023 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
ATP1A1P05023 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP1A1P05023 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
ATP1A1P05023 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP1A1P05023 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.05■□□□□ 0.16
ATP1A1P05023 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP1A1P05023 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP1A1P05023 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP1A1P05023 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP1A1P05023 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.05■□□□□ 0.16
ATP1A1P05023 SBF1P1-201ENST00000444527 5631 ntBASIC16.05■□□□□ 0.16
ATP1A1P05023 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.05■□□□□ 0.16
ATP1A1P05023 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP1A1P05023 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATP1A1P05023 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATP1A1P05023 CICP16-201ENST00000502609 2813 ntBASIC16.04■□□□□ 0.16
ATP1A1P05023 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP1A1P05023 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATP1A1P05023 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP1A1P05023 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATP1A1P05023 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATP1A1P05023 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ATP1A1P05023 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP1A1P05023 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.04■□□□□ 0.16
ATP1A1P05023 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC16.04■□□□□ 0.16
ATP1A1P05023 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC16.04■□□□□ 0.16
ATP1A1P05023 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP1A1P05023 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.04■□□□□ 0.16
ATP1A1P05023 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATP1A1P05023 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATP1A1P05023 AC090505.1-201ENST00000430515 1834 ntBASIC16.04■□□□□ 0.16
ATP1A1P05023 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP1A1P05023 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATP1A1P05023 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP1A1P05023 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.04■□□□□ 0.16
ATP1A1P05023 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.04■□□□□ 0.16
ATP1A1P05023 AC055876.3-201ENST00000431496 288 ntBASIC16.04■□□□□ 0.16
ATP1A1P05023 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.04■□□□□ 0.16
ATP1A1P05023 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.04■□□□□ 0.16
ATP1A1P05023 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.04■□□□□ 0.16
ATP1A1P05023 AC093214.1-201ENST00000511688 1107 ntBASIC16.04■□□□□ 0.16
ATP1A1P05023 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.04■□□□□ 0.16
ATP1A1P05023 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.04■□□□□ 0.16
ATP1A1P05023 AC138649.4-201ENST00000612222 287 ntBASIC16.04■□□□□ 0.16
ATP1A1P05023 AL033527.5-202ENST00000641632 1098 ntBASIC16.04■□□□□ 0.16
ATP1A1P05023 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP1A1P05023 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATP1A1P05023 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.04■□□□□ 0.16
ATP1A1P05023 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATP1A1P05023 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP1A1P05023 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC16.04■□□□□ 0.16
ATP1A1P05023 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATP1A1P05023 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP1A1P05023 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP1A1P05023 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP1A1P05023 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP1A1P05023 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1A1P05023 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1A1P05023 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1A1P05023 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1A1P05023 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1A1P05023 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP1A1P05023 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1A1P05023 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1A1P05023 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
ATP1A1P05023 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP1A1P05023 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
ATP1A1P05023 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1A1P05023 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1A1P05023 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP1A1P05023 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1A1P05023 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1A1P05023 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP1A1P05023 TOMM22P5-201ENST00000416399 439 ntBASIC16.03■□□□□ 0.16
ATP1A1P05023 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP1A1P05023 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.03■□□□□ 0.16
ATP1A1P05023 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.03■□□□□ 0.16
ATP1A1P05023 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1A1P05023 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
ATP1A1P05023 AC097493.3-201ENST00000509725 367 ntBASIC16.03■□□□□ 0.16
ATP1A1P05023 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP1A1P05023 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.03■□□□□ 0.16
ATP1A1P05023 AL390754.1-201ENST00000619088 582 ntBASIC16.03■□□□□ 0.16
ATP1A1P05023 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1A1P05023 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP1A1P05023 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP1A1P05023 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP1A1P05023 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1A1P05023 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1A1P05023 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1A1P05023 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1A1P05023 DGCR9-201ENST00000609630 2415 ntBASIC16.03■□□□□ 0.16
ATP1A1P05023 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ATP1A1P05023 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATP1A1P05023 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms