Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 BX842568.4-201ENST00000421222 227 ntBASIC14.26□□□□□ -0.13
MT-ND1P03886 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
MT-ND1P03886 SLED1-202ENST00000512051 380 ntBASIC14.26□□□□□ -0.13
MT-ND1P03886 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.26□□□□□ -0.13
MT-ND1P03886 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.26□□□□□ -0.13
MT-ND1P03886 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
MT-ND1P03886 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
MT-ND1P03886 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.26□□□□□ -0.13
MT-ND1P03886 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 AL359881.3-201ENST00000602640 1721 ntBASIC14.26□□□□□ -0.13
MT-ND1P03886 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.26□□□□□ -0.13
MT-ND1P03886 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
MT-ND1P03886 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
MT-ND1P03886 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MT-ND1P03886 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MT-ND1P03886 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
MT-ND1P03886 AC130686.1-201ENST00000622936 2466 ntBASIC14.25□□□□□ -0.13
MT-ND1P03886 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.25□□□□□ -0.13
MT-ND1P03886 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
MT-ND1P03886 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.25□□□□□ -0.13
MT-ND1P03886 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.25□□□□□ -0.13
MT-ND1P03886 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.25□□□□□ -0.13
MT-ND1P03886 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
MT-ND1P03886 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MT-ND1P03886 AC012617.1-204ENST00000586340 2305 ntBASIC14.25□□□□□ -0.13
MT-ND1P03886 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MT-ND1P03886 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MT-ND1P03886 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
MT-ND1P03886 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.25□□□□□ -0.13
MT-ND1P03886 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.25□□□□□ -0.13
MT-ND1P03886 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MT-ND1P03886 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MT-ND1P03886 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
MT-ND1P03886 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MT-ND1P03886 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
MT-ND1P03886 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
MT-ND1P03886 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MT-ND1P03886 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MT-ND1P03886 SPDYE7P-202ENST00000420373 878 ntBASIC14.25□□□□□ -0.13
MT-ND1P03886 MTND6P24-201ENST00000440466 518 ntBASIC14.25□□□□□ -0.13
MT-ND1P03886 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.25□□□□□ -0.13
MT-ND1P03886 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MT-ND1P03886 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.25□□□□□ -0.13
MT-ND1P03886 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.25□□□□□ -0.13
MT-ND1P03886 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MT-ND1P03886 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.25□□□□□ -0.13
MT-ND1P03886 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MT-ND1P03886 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.25□□□□□ -0.13
MT-ND1P03886 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MT-ND1P03886 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
MT-ND1P03886 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
MT-ND1P03886 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MT-ND1P03886 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MT-ND1P03886 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MT-ND1P03886 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
MT-ND1P03886 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.25□□□□□ -0.13
MT-ND1P03886 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MT-ND1P03886 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MT-ND1P03886 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
MT-ND1P03886 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MT-ND1P03886 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
MT-ND1P03886 AC131212.3-201ENST00000624087 4219 ntBASIC14.25□□□□□ -0.13
MT-ND1P03886 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MT-ND1P03886 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
MT-ND1P03886 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MT-ND1P03886 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MT-ND1P03886 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MT-ND1P03886 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MT-ND1P03886 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.25□□□□□ -0.13
MT-ND1P03886 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MT-ND1P03886 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MT-ND1P03886 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MT-ND1P03886 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MT-ND1P03886 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MT-ND1P03886 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MT-ND1P03886 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.24□□□□□ -0.13
MT-ND1P03886 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.24□□□□□ -0.13
MT-ND1P03886 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.24□□□□□ -0.13
MT-ND1P03886 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.24□□□□□ -0.13
MT-ND1P03886 AL157414.3-201ENST00000624276 1954 ntBASIC14.24□□□□□ -0.13
MT-ND1P03886 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
MT-ND1P03886 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MT-ND1P03886 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MT-ND1P03886 AC211486.1-202ENST00000416371 468 ntBASIC14.24□□□□□ -0.13
MT-ND1P03886 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.24□□□□□ -0.13
MT-ND1P03886 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms