Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 HLA-K-203ENST00000430151 1046 ntBASIC15.8■□□□□ 0.12
APOEP02649 AC016694.1-201ENST00000434179 700 ntBASIC15.8■□□□□ 0.12
APOEP02649 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
APOEP02649 ACA64.2-201ENST00000459014 129 ntBASIC15.8■□□□□ 0.12
APOEP02649 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.8■□□□□ 0.12
APOEP02649 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.8■□□□□ 0.12
APOEP02649 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.8■□□□□ 0.12
APOEP02649 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
APOEP02649 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.8■□□□□ 0.12
APOEP02649 AL603764.1-201ENST00000636452 321 ntBASIC15.8■□□□□ 0.12
APOEP02649 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.8■□□□□ 0.12
APOEP02649 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.8■□□□□ 0.12
APOEP02649 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.8■□□□□ 0.12
APOEP02649 AC023908.3-201ENST00000564211 3047 ntBASIC15.8■□□□□ 0.12
APOEP02649 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.8■□□□□ 0.12
APOEP02649 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.8■□□□□ 0.12
APOEP02649 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.8■□□□□ 0.12
APOEP02649 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOEP02649 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.79■□□□□ 0.12
APOEP02649 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOEP02649 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
APOEP02649 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOEP02649 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOEP02649 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
APOEP02649 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
APOEP02649 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.79■□□□□ 0.12
APOEP02649 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOEP02649 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
APOEP02649 AL157414.3-201ENST00000624276 1954 ntBASIC15.79■□□□□ 0.12
APOEP02649 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOEP02649 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.79■□□□□ 0.12
APOEP02649 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOEP02649 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOEP02649 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOEP02649 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.79■□□□□ 0.12
APOEP02649 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
APOEP02649 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
APOEP02649 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.79■□□□□ 0.12
APOEP02649 AC079776.1-201ENST00000401540 1152 ntBASIC15.79■□□□□ 0.12
APOEP02649 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOEP02649 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.79■□□□□ 0.12
APOEP02649 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOEP02649 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
APOEP02649 CROCCP4-201ENST00000457096 498 ntBASIC15.79■□□□□ 0.12
APOEP02649 AC007551.1-201ENST00000457394 519 ntBASIC15.79■□□□□ 0.12
APOEP02649 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.79■□□□□ 0.12
APOEP02649 FTH1P14-201ENST00000482930 551 ntBASIC15.79■□□□□ 0.12
APOEP02649 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.79■□□□□ 0.12
APOEP02649 IGHV3-71-201ENST00000523324 359 ntBASIC15.79■□□□□ 0.12
APOEP02649 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.79■□□□□ 0.12
APOEP02649 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.79■□□□□ 0.12
APOEP02649 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.79■□□□□ 0.12
APOEP02649 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.79■□□□□ 0.12
APOEP02649 AL512343.1-201ENST00000605837 169 ntBASIC15.79■□□□□ 0.12
APOEP02649 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.79■□□□□ 0.12
APOEP02649 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOEP02649 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.79■□□□□ 0.12
APOEP02649 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.79■□□□□ 0.12
APOEP02649 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOEP02649 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.79■□□□□ 0.12
APOEP02649 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOEP02649 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOEP02649 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOEP02649 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.79■□□□□ 0.12
APOEP02649 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.79■□□□□ 0.12
APOEP02649 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.79■□□□□ 0.12
APOEP02649 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOEP02649 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
APOEP02649 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOEP02649 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
APOEP02649 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
APOEP02649 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
APOEP02649 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
APOEP02649 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
APOEP02649 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
APOEP02649 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
APOEP02649 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
APOEP02649 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
APOEP02649 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.78■□□□□ 0.12
APOEP02649 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.78■□□□□ 0.12
APOEP02649 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
APOEP02649 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
APOEP02649 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms