Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CSPG5O95196 AC009090.5-201ENST00000624886 2285 ntBASIC16.16■□□□□ 0.18
CSPG5O95196 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.16■□□□□ 0.18
CSPG5O95196 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CSPG5O95196 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CSPG5O95196 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.16■□□□□ 0.18
CSPG5O95196 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
CSPG5O95196 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.16■□□□□ 0.18
CSPG5O95196 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.16■□□□□ 0.18
CSPG5O95196 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.16■□□□□ 0.18
CSPG5O95196 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.16■□□□□ 0.18
CSPG5O95196 RPL17P11-201ENST00000417593 544 ntBASIC16.16■□□□□ 0.18
CSPG5O95196 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.16■□□□□ 0.18
CSPG5O95196 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.16■□□□□ 0.18
CSPG5O95196 FGFR3P1-201ENST00000449999 601 ntBASIC16.16■□□□□ 0.18
CSPG5O95196 AC008267.1-201ENST00000474858 1069 ntBASIC16.16■□□□□ 0.18
CSPG5O95196 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.16■□□□□ 0.18
CSPG5O95196 AC022616.1-201ENST00000518688 554 ntBASIC16.16■□□□□ 0.18
CSPG5O95196 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.16■□□□□ 0.18
CSPG5O95196 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.16■□□□□ 0.18
CSPG5O95196 AF254983.2-201ENST00000612331 135 ntBASIC16.16■□□□□ 0.18
CSPG5O95196 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.16■□□□□ 0.18
CSPG5O95196 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.16■□□□□ 0.18
CSPG5O95196 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CSPG5O95196 AC084364.1-201ENST00000551967 1556 ntBASIC16.16■□□□□ 0.18
CSPG5O95196 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.16■□□□□ 0.18
CSPG5O95196 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.16■□□□□ 0.18
CSPG5O95196 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.16■□□□□ 0.18
CSPG5O95196 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSPG5O95196 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSPG5O95196 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSPG5O95196 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CSPG5O95196 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSPG5O95196 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSPG5O95196 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSPG5O95196 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.15■□□□□ 0.18
CSPG5O95196 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.15■□□□□ 0.18
CSPG5O95196 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSPG5O95196 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSPG5O95196 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSPG5O95196 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CSPG5O95196 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.15■□□□□ 0.18
CSPG5O95196 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.15■□□□□ 0.18
CSPG5O95196 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSPG5O95196 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSPG5O95196 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSPG5O95196 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSPG5O95196 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.15■□□□□ 0.18
CSPG5O95196 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.15■□□□□ 0.18
CSPG5O95196 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.15■□□□□ 0.18
CSPG5O95196 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.15■□□□□ 0.18
CSPG5O95196 AL596276.2-201ENST00000447525 331 ntBASIC16.15■□□□□ 0.18
CSPG5O95196 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.15■□□□□ 0.18
CSPG5O95196 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.15■□□□□ 0.18
CSPG5O95196 MIR3147-201ENST00000577811 66 ntBASIC16.15■□□□□ 0.18
CSPG5O95196 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSPG5O95196 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CSPG5O95196 AC012044.1-201ENST00000603431 297 ntBASIC16.15■□□□□ 0.18
CSPG5O95196 AP003419.4-201ENST00000616071 517 ntBASIC16.15■□□□□ 0.18
CSPG5O95196 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSPG5O95196 PRSS30P-206ENST00000641773 873 ntBASIC16.15■□□□□ 0.18
CSPG5O95196 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSPG5O95196 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CSPG5O95196 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSPG5O95196 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSPG5O95196 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSPG5O95196 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSPG5O95196 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.15■□□□□ 0.18
CSPG5O95196 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.15■□□□□ 0.18
CSPG5O95196 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.15■□□□□ 0.18
CSPG5O95196 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.15■□□□□ 0.18
CSPG5O95196 AC104640.1-201ENST00000562617 2109 ntBASIC16.15■□□□□ 0.18
CSPG5O95196 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms