Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF40O75150 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.35■□□□□ 0.21
RNF40O75150 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF40O75150 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF40O75150 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.35■□□□□ 0.21
RNF40O75150 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.35■□□□□ 0.21
RNF40O75150 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.35■□□□□ 0.21
RNF40O75150 TMEM261P1-201ENST00000604899 340 ntBASIC16.35■□□□□ 0.21
RNF40O75150 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RNF40O75150 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF40O75150 AL033527.5-201ENST00000641382 801 ntBASIC16.35■□□□□ 0.21
RNF40O75150 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RNF40O75150 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF40O75150 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF40O75150 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF40O75150 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF40O75150 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF40O75150 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RNF40O75150 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF40O75150 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF40O75150 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF40O75150 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF40O75150 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF40O75150 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF40O75150 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF40O75150 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RNF40O75150 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF40O75150 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF40O75150 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF40O75150 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RNF40O75150 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RNF40O75150 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF40O75150 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF40O75150 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF40O75150 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF40O75150 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF40O75150 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF40O75150 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF40O75150 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RNF40O75150 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF40O75150 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF40O75150 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF40O75150 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF40O75150 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF40O75150 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
RNF40O75150 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.34■□□□□ 0.21
RNF40O75150 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RNF40O75150 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF40O75150 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF40O75150 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF40O75150 MIR4259-201ENST00000584466 101 ntBASIC16.34■□□□□ 0.21
RNF40O75150 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF40O75150 OR13I1P-201ENST00000609811 1264 ntBASIC16.34■□□□□ 0.21
RNF40O75150 MIR8072-201ENST00000614241 80 ntBASIC16.34■□□□□ 0.21
RNF40O75150 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RNF40O75150 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF40O75150 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF40O75150 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF40O75150 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF40O75150 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RNF40O75150 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF40O75150 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF40O75150 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF40O75150 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF40O75150 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RNF40O75150 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF40O75150 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF40O75150 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF40O75150 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF40O75150 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF40O75150 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RNF40O75150 APP-205ENST00000358918 2366 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF40O75150 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RNF40O75150 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RNF40O75150 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.33■□□□□ 0.21
RNF40O75150 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF40O75150 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
RNF40O75150 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF40O75150 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.33■□□□□ 0.21
RNF40O75150 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF40O75150 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC16.33■□□□□ 0.21
RNF40O75150 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF40O75150 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
RNF40O75150 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF40O75150 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF40O75150 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF40O75150 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RNF40O75150 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF40O75150 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF40O75150 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF40O75150 FO393414.2-201ENST00000405153 598 ntBASIC16.33■□□□□ 0.2
RNF40O75150 AC010740.1-201ENST00000417035 684 ntBASIC16.33■□□□□ 0.2
RNF40O75150 HIST3H2BA-201ENST00000436555 524 ntBASIC16.33■□□□□ 0.2
RNF40O75150 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF40O75150 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.33■□□□□ 0.2
RNF40O75150 AC104596.2-201ENST00000512793 793 ntBASIC16.33■□□□□ 0.2
RNF40O75150 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF40O75150 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF40O75150 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
RNF40O75150 RARRES2P5-201ENST00000564013 466 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms