Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 MBLAC2-202ENST00000514906 1936 ntBASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 AL158070.2-201ENST00000623713 1621 ntBASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 BX842568.4-201ENST00000421222 227 ntBASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 AL158212.4-201ENST00000624062 1286 ntBASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 AC079781.5-202ENST00000641784 3743 ntBASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 TUBB3P1-201ENST00000405796 1332 ntBASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 AC093525.8-201ENST00000624099 1342 ntBASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRIM49D1C9J1S8 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 AC027369.6-201ENST00000525520 931 ntBASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 AL844908.2-201ENST00000609461 460 ntBASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 Z92544.3-201ENST00000624747 417 ntBASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 AC087499.5-201ENST00000452760 1342 ntBASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRIM49D1C9J1S8 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms