Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 SLC4A1APP2-201ENST00000424054 1259 ntBASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 AC108751.1-201ENST00000490852 363 ntBASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 AC016397.2-201ENST00000624848 1985 ntBASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 ZNF259P1-201ENST00000407656 1365 ntBASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBQLN2Q9UHD9 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 KRT8P22-201ENST00000562317 1415 ntBASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 AC007967.2-201ENST00000432613 625 ntBASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 IGHV3-22-201ENST00000520721 359 ntBASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 ETFA-208ENST00000559602 792 ntTSL 3 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 Z83851.2-201ENST00000609564 659 ntBASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBQLN2Q9UHD9 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 201.8 ms