Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX1-2Q9UD57 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX1-2Q9UD57 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
NKX1-2Q9UD57 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NKX1-2Q9UD57 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX1-2Q9UD57 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.31□□□□□ -0.12
NKX1-2Q9UD57 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 AL139010.1-201ENST00000454878 894 ntBASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX1-2Q9UD57 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 AC008608.2-201ENST00000606089 416 ntBASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 AL645728.2-202ENST00000641679 227 ntBASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX1-2Q9UD57 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms