Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 AL805961.2-201ENST00000642139 4817 ntBASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 AL355306.1-201ENST00000415580 579 ntBASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 RN7SL589P-201ENST00000481268 310 ntBASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 FAM86C2P-203ENST00000528684 1004 ntBASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 MAX-210ENST00000555419 765 ntTSL 5 BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 AL513190.1-201ENST00000621254 727 ntBASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 AC055811.4-201ENST00000624039 1754 ntBASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
SND1-IT1Q9HBX3 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC10.15□□□□□ -0.79
SND1-IT1Q9HBX3 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
SND1-IT1Q9HBX3 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
SND1-IT1Q9HBX3 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
SND1-IT1Q9HBX3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
SND1-IT1Q9HBX3 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC10.15□□□□□ -0.79
SND1-IT1Q9HBX3 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
SND1-IT1Q9HBX3 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC10.15□□□□□ -0.79
SND1-IT1Q9HBX3 AC104109.2-201ENST00000602919 1418 ntBASIC10.15□□□□□ -0.79
SND1-IT1Q9HBX3 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
SND1-IT1Q9HBX3 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC10.15□□□□□ -0.79
SND1-IT1Q9HBX3 TNN-202ENST00000621086 4234 ntTSL 5 BASIC10.15□□□□□ -0.79
SND1-IT1Q9HBX3 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC10.15□□□□□ -0.79
SND1-IT1Q9HBX3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
SND1-IT1Q9HBX3 GALC-206ENST00000544807 2528 ntTSL 2 BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms