Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 HTR5BP-201ENST00000430851 1154 ntBASIC18.54■□□□□ 0.56
UPF2Q9HAU5 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC18.54■□□□□ 0.56
UPF2Q9HAU5 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.54■□□□□ 0.56
UPF2Q9HAU5 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.54■□□□□ 0.56
UPF2Q9HAU5 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.54■□□□□ 0.56
UPF2Q9HAU5 AC025048.3-201ENST00000590609 569 ntBASIC18.54■□□□□ 0.56
UPF2Q9HAU5 AC022145.2-201ENST00000598203 171 ntBASIC18.54■□□□□ 0.56
UPF2Q9HAU5 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.54■□□□□ 0.56
UPF2Q9HAU5 AC005702.4-201ENST00000618393 416 ntBASIC18.54■□□□□ 0.56
UPF2Q9HAU5 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPF2Q9HAU5 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
UPF2Q9HAU5 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPF2Q9HAU5 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UPF2Q9HAU5 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UPF2Q9HAU5 AC079781.5-202ENST00000641784 3743 ntBASIC18.54■□□□□ 0.56
UPF2Q9HAU5 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPF2Q9HAU5 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPF2Q9HAU5 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPF2Q9HAU5 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 GOLGA8VP-201ENST00000559009 1798 ntBASIC18.53■□□□□ 0.56
UPF2Q9HAU5 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 AL589739.1-201ENST00000607720 493 ntBASIC18.53■□□□□ 0.56
UPF2Q9HAU5 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 AC120114.3-201ENST00000611923 658 ntBASIC18.53■□□□□ 0.56
UPF2Q9HAU5 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC18.53■□□□□ 0.56
UPF2Q9HAU5 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPF2Q9HAU5 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
UPF2Q9HAU5 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPF2Q9HAU5 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UPF2Q9HAU5 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPF2Q9HAU5 AL360270.3-201ENST00000609118 1348 ntBASIC18.52■□□□□ 0.56
UPF2Q9HAU5 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UPF2Q9HAU5 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPF2Q9HAU5 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
UPF2Q9HAU5 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPF2Q9HAU5 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UPF2Q9HAU5 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UPF2Q9HAU5 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPF2Q9HAU5 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
UPF2Q9HAU5 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
UPF2Q9HAU5 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UPF2Q9HAU5 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
UPF2Q9HAU5 RBPMS2P1-201ENST00000437762 623 ntBASIC18.52■□□□□ 0.56
UPF2Q9HAU5 RPL13P2-201ENST00000440687 659 ntBASIC18.52■□□□□ 0.56
UPF2Q9HAU5 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.52■□□□□ 0.56
UPF2Q9HAU5 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.52■□□□□ 0.56
UPF2Q9HAU5 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
UPF2Q9HAU5 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.52■□□□□ 0.56
UPF2Q9HAU5 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
UPF2Q9HAU5 AC105339.1-204ENST00000636249 355 ntBASIC18.52■□□□□ 0.56
UPF2Q9HAU5 AL033527.5-202ENST00000641632 1098 ntBASIC18.52■□□□□ 0.56
UPF2Q9HAU5 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPF2Q9HAU5 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UPF2Q9HAU5 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC18.52■□□□□ 0.55
UPF2Q9HAU5 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
UPF2Q9HAU5 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UPF2Q9HAU5 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
UPF2Q9HAU5 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
UPF2Q9HAU5 AC023090.2-201ENST00000625182 2110 ntBASIC18.52■□□□□ 0.55
UPF2Q9HAU5 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UPF2Q9HAU5 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
UPF2Q9HAU5 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
UPF2Q9HAU5 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms