Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH11XQ9BZA7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH11XQ9BZA7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH11XQ9BZA7 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
PCDH11XQ9BZA7 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PCDH11XQ9BZA7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
PCDH11XQ9BZA7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH11XQ9BZA7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH11XQ9BZA7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH11XQ9BZA7 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH11XQ9BZA7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH11XQ9BZA7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH11XQ9BZA7 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH11XQ9BZA7 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PCDH11XQ9BZA7 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDH11XQ9BZA7 RN7SL81P-201ENST00000493781 261 ntBASIC19.18■□□□□ 0.66
PCDH11XQ9BZA7 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC19.18■□□□□ 0.66
PCDH11XQ9BZA7 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDH11XQ9BZA7 AC009084.3-201ENST00000623356 437 ntBASIC19.18■□□□□ 0.66
PCDH11XQ9BZA7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PCDH11XQ9BZA7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH11XQ9BZA7 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH11XQ9BZA7 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDH11XQ9BZA7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDH11XQ9BZA7 AC025271.4-201ENST00000621477 1726 ntBASIC19.18■□□□□ 0.66
PCDH11XQ9BZA7 TMBIM7P-203ENST00000641617 1718 ntBASIC19.18■□□□□ 0.66
PCDH11XQ9BZA7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 LINC01101-201ENST00000622953 1884 ntBASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 BUD31-205ENST00000456893 512 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 AC009560.1-201ENST00000620208 434 ntBASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 MIR6858-201ENST00000620733 67 ntBASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 CMC2-224ENST00000630396 481 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 API5-203ENST00000455725 2257 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH11XQ9BZA7 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 AC092135.3-201ENST00000624151 1846 ntBASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 RHEB-207ENST00000496004 744 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 ORAOV1P1-201ENST00000503108 395 ntBASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 TMCO5B-205ENST00000530020 894 ntBASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 AL136172.1-201ENST00000598590 1394 ntBASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 CYP51A1P3-201ENST00000400072 1428 ntBASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH11XQ9BZA7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDH11XQ9BZA7 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH11XQ9BZA7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH11XQ9BZA7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDH11XQ9BZA7 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH11XQ9BZA7 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH11XQ9BZA7 PCDHGB8P-201ENST00000502926 1973 ntBASIC19.15■□□□□ 0.66
PCDH11XQ9BZA7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PCDH11XQ9BZA7 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.15■□□□□ 0.66
PCDH11XQ9BZA7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH11XQ9BZA7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH11XQ9BZA7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH11XQ9BZA7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH11XQ9BZA7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms