Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 AL136309.1-201ENST00000403917 691 ntBASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 AC010900.1-201ENST00000449849 1296 ntBASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 AC090142.2-201ENST00000483263 416 ntBASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 CR383656.3-201ENST00000551315 183 ntBASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 AL390728.6-201ENST00000566446 1246 ntBASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 AC092053.1-201ENST00000605787 1936 ntBASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 AL662844.4-201ENST00000606367 2838 ntBASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 RN7SL470P-201ENST00000583069 259 ntBASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 AC012073.1-201ENST00000606114 1108 ntBASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 WASH7P-201ENST00000488147 1351 ntBASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CNTNAP3Q9BZ76 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms