Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 AC022137.2-201ENST00000503482 481 ntBASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 MIR3197-201ENST00000582241 73 ntBASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 AC133539.2-201ENST00000604757 467 ntBASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 AC011840.2-201ENST00000563063 1520 ntBASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 AL391825.1-201ENST00000457671 1364 ntBASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 AC007969.1-201ENST00000433675 447 ntBASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 AP001002.3-201ENST00000623482 206 ntBASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 BEND3P1-201ENST00000421591 1944 ntBASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 MBLAC2-202ENST00000514906 1936 ntBASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO3Q9BXY4 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 AC009093.2-202ENST00000620513 2079 ntBASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms