Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 AC079781.5-202ENST00000641784 3743 ntBASIC12.97□□□□□ -0.33
NICN1Q9BSH3 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 DNAJB3-201ENST00000446806 729 ntBASIC12.97□□□□□ -0.33
NICN1Q9BSH3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 AC074044.1-201ENST00000609673 707 ntBASIC12.97□□□□□ -0.33
NICN1Q9BSH3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 AP001059.3-201ENST00000619053 235 ntBASIC12.97□□□□□ -0.33
NICN1Q9BSH3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.97□□□□□ -0.33
NICN1Q9BSH3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NICN1Q9BSH3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.96□□□□□ -0.33
NICN1Q9BSH3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 AL360270.3-201ENST00000609118 1348 ntBASIC12.96□□□□□ -0.33
NICN1Q9BSH3 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.96□□□□□ -0.33
NICN1Q9BSH3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 AL109936.8-201ENST00000641772 604 ntBASIC12.96□□□□□ -0.33
NICN1Q9BSH3 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.96□□□□□ -0.33
NICN1Q9BSH3 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
NICN1Q9BSH3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
NICN1Q9BSH3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.96□□□□□ -0.34
NICN1Q9BSH3 AC055811.4-201ENST00000624039 1754 ntBASIC12.96□□□□□ -0.34
NICN1Q9BSH3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
NICN1Q9BSH3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NICN1Q9BSH3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.96□□□□□ -0.34
NICN1Q9BSH3 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NICN1Q9BSH3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NICN1Q9BSH3 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms