Protein–RNA interactions for Protein: Q92925

SMARCD2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, humanhuman

Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2Q92925 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC15.31■□□□□ 0.04
SMARCD2Q92925 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.31■□□□□ 0.04
SMARCD2Q92925 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.31■□□□□ 0.04
SMARCD2Q92925 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.31■□□□□ 0.04
SMARCD2Q92925 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.31■□□□□ 0.04
SMARCD2Q92925 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.31■□□□□ 0.04
SMARCD2Q92925 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.31■□□□□ 0.04
SMARCD2Q92925 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
SMARCD2Q92925 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMARCD2Q92925 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMARCD2Q92925 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMARCD2Q92925 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.31■□□□□ 0.04
SMARCD2Q92925 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
SMARCD2Q92925 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SMARCD2Q92925 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMARCD2Q92925 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMARCD2Q92925 MROH4P-201ENST00000431302 1578 ntBASIC15.31■□□□□ 0.04
SMARCD2Q92925 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMARCD2Q92925 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SMARCD2Q92925 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMARCD2Q92925 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.31■□□□□ 0.04
SMARCD2Q92925 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMARCD2Q92925 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.31■□□□□ 0.04
SMARCD2Q92925 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
SMARCD2Q92925 AC023024.2-201ENST00000623561 1993 ntBASIC15.31■□□□□ 0.04
SMARCD2Q92925 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMARCD2Q92925 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMARCD2Q92925 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SMARCD2Q92925 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMARCD2Q92925 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
SMARCD2Q92925 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMARCD2Q92925 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SMARCD2Q92925 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMARCD2Q92925 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMARCD2Q92925 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SMARCD2Q92925 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMARCD2Q92925 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMARCD2Q92925 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMARCD2Q92925 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.3■□□□□ 0.04
SMARCD2Q92925 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SMARCD2Q92925 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SMARCD2Q92925 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.3■□□□□ 0.04
SMARCD2Q92925 REXO1L2P-201ENST00000425429 2069 ntBASIC15.3■□□□□ 0.04
SMARCD2Q92925 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.3■□□□□ 0.04
SMARCD2Q92925 AL645933.1-201ENST00000440087 609 ntBASIC15.3■□□□□ 0.04
SMARCD2Q92925 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC15.3■□□□□ 0.04
SMARCD2Q92925 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.3■□□□□ 0.04
SMARCD2Q92925 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SMARCD2Q92925 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SMARCD2Q92925 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.3■□□□□ 0.04
SMARCD2Q92925 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SMARCD2Q92925 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC15.3■□□□□ 0.04
SMARCD2Q92925 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMARCD2Q92925 IQSEC3P1-201ENST00000538799 536 ntBASIC15.3■□□□□ 0.04
SMARCD2Q92925 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMARCD2Q92925 AC126365.1-201ENST00000578585 1514 ntBASIC15.3■□□□□ 0.04
SMARCD2Q92925 AL157813.1-201ENST00000612996 587 ntBASIC15.3■□□□□ 0.04
SMARCD2Q92925 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.3■□□□□ 0.04
SMARCD2Q92925 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMARCD2Q92925 C18orf15-201ENST00000623680 2534 ntBASIC15.3■□□□□ 0.04
SMARCD2Q92925 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SMARCD2Q92925 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMARCD2Q92925 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SMARCD2Q92925 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMARCD2Q92925 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMARCD2Q92925 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.3■□□□□ 0.04
SMARCD2Q92925 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SMARCD2Q92925 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMARCD2Q92925 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMARCD2Q92925 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMARCD2Q92925 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.29■□□□□ 0.04
SMARCD2Q92925 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SMARCD2Q92925 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.29■□□□□ 0.04
SMARCD2Q92925 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMARCD2Q92925 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMARCD2Q92925 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMARCD2Q92925 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMARCD2Q92925 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMARCD2Q92925 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.29■□□□□ 0.04
SMARCD2Q92925 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMARCD2Q92925 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMARCD2Q92925 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMARCD2Q92925 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMARCD2Q92925 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMARCD2Q92925 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SMARCD2Q92925 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SMARCD2Q92925 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.29■□□□□ 0.04
SMARCD2Q92925 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMARCD2Q92925 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMARCD2Q92925 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMARCD2Q92925 WASH3P-207ENST00000560956 1394 ntBASIC15.29■□□□□ 0.04
SMARCD2Q92925 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMARCD2Q92925 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SMARCD2Q92925 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SMARCD2Q92925 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMARCD2Q92925 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC15.29■□□□□ 0.04
SMARCD2Q92925 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMARCD2Q92925 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMARCD2Q92925 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.29■□□□□ 0.04
SMARCD2Q92925 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms