Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DDX1Q92499 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
DDX1Q92499 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
DDX1Q92499 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DDX1Q92499 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
DDX1Q92499 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.98■□□□□ 0.15
DDX1Q92499 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
DDX1Q92499 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
DDX1Q92499 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
DDX1Q92499 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
DDX1Q92499 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
DDX1Q92499 ANKRD19P-201ENST00000338192 862 ntBASIC15.98■□□□□ 0.15
DDX1Q92499 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
DDX1Q92499 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 CTBP2P5-201ENST00000454986 1264 ntBASIC15.98■□□□□ 0.15
DDX1Q92499 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
DDX1Q92499 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.98■□□□□ 0.15
DDX1Q92499 AC233724.13-201ENST00000598383 410 ntBASIC15.98■□□□□ 0.15
DDX1Q92499 AC106872.11-201ENST00000605838 421 ntBASIC15.98■□□□□ 0.15
DDX1Q92499 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
DDX1Q92499 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.98■□□□□ 0.15
DDX1Q92499 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 AL138709.1-201ENST00000614840 1693 ntBASIC15.98■□□□□ 0.15
DDX1Q92499 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
DDX1Q92499 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.98■□□□□ 0.15
DDX1Q92499 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DDX1Q92499 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DDX1Q92499 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
DDX1Q92499 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DDX1Q92499 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.97■□□□□ 0.15
DDX1Q92499 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
DDX1Q92499 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DDX1Q92499 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
DDX1Q92499 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
DDX1Q92499 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
DDX1Q92499 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.97■□□□□ 0.15
DDX1Q92499 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.97■□□□□ 0.15
DDX1Q92499 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
DDX1Q92499 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DDX1Q92499 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DDX1Q92499 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
DDX1Q92499 BAATP1-201ENST00000412284 1225 ntBASIC15.97■□□□□ 0.15
DDX1Q92499 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DDX1Q92499 FO681548.1-201ENST00000455617 1132 ntBASIC15.97■□□□□ 0.15
DDX1Q92499 TPT1P11-201ENST00000458482 498 ntBASIC15.97■□□□□ 0.15
DDX1Q92499 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.97■□□□□ 0.15
DDX1Q92499 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
DDX1Q92499 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.97■□□□□ 0.15
DDX1Q92499 AC010319.3-201ENST00000597028 470 ntBASIC15.97■□□□□ 0.15
DDX1Q92499 AC145423.3-201ENST00000615987 467 ntBASIC15.97■□□□□ 0.15
DDX1Q92499 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
DDX1Q92499 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
DDX1Q92499 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DDX1Q92499 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
DDX1Q92499 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
DDX1Q92499 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DDX1Q92499 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DDX1Q92499 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.97■□□□□ 0.15
DDX1Q92499 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DDX1Q92499 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DDX1Q92499 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
DDX1Q92499 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DDX1Q92499 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DDX1Q92499 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.97■□□□□ 0.15
DDX1Q92499 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
DDX1Q92499 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.97■□□□□ 0.15
DDX1Q92499 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DDX1Q92499 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DDX1Q92499 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
DDX1Q92499 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
DDX1Q92499 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DDX1Q92499 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DDX1Q92499 AL138725.1-201ENST00000407347 1314 ntBASIC15.96■□□□□ 0.15
DDX1Q92499 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
DDX1Q92499 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms