Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 AL008721.1-201ENST00000609964 604 ntBASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 AL354702.1-201ENST00000442006 1960 ntBASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMARCC2Q8TAQ2 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 AC015802.1-201ENST00000588104 1449 ntBASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 BOLA2P3-201ENST00000404566 256 ntBASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 EIF3FP3-201ENST00000434851 1086 ntBASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 AC106760.1-201ENST00000508690 800 ntBASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 AC063926.3-201ENST00000624734 5658 ntBASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMARCC2Q8TAQ2 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
SMARCC2Q8TAQ2 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMARCC2Q8TAQ2 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.58■□□□□ 0.41
SMARCC2Q8TAQ2 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.41
SMARCC2Q8TAQ2 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SMARCC2Q8TAQ2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
SMARCC2Q8TAQ2 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMARCC2Q8TAQ2 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMARCC2Q8TAQ2 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMARCC2Q8TAQ2 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.58■□□□□ 0.41
SMARCC2Q8TAQ2 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SMARCC2Q8TAQ2 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 KLF2P2-201ENST00000416807 1039 ntBASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 AC114812.1-204ENST00000449669 728 ntBASIC17.58■□□□□ 0.4
SMARCC2Q8TAQ2 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms