Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 TUBB3P1-201ENST00000405796 1332 ntBASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 AC138969.3-201ENST00000546612 1459 ntBASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 AC138932.2-201ENST00000548268 1459 ntBASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 AC126755.4-201ENST00000549796 1459 ntBASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 AC011474.4-201ENST00000623523 2076 ntBASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 METTL21AP1-201ENST00000438852 635 ntBASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 FAM86GP-201ENST00000448322 971 ntBASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 AC015911.4-201ENST00000588022 1070 ntBASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PIK3C3Q8NEB9 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 CETN4P-206ENST00000642099 2168 ntBASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 KRT18P64-201ENST00000434946 1219 ntBASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 AC125807.1-201ENST00000483097 614 ntBASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 MIR6069-201ENST00000620069 79 ntBASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms