Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VRK2Q86Y07 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK2Q86Y07 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VRK2Q86Y07 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK2Q86Y07 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VRK2Q86Y07 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.94□□□□□ -0.18
VRK2Q86Y07 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.94□□□□□ -0.18
VRK2Q86Y07 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.94□□□□□ -0.18
VRK2Q86Y07 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK2Q86Y07 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VRK2Q86Y07 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK2Q86Y07 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK2Q86Y07 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK2Q86Y07 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
VRK2Q86Y07 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK2Q86Y07 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.94□□□□□ -0.18
VRK2Q86Y07 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
VRK2Q86Y07 AL442647.2-201ENST00000429864 857 ntBASIC13.94□□□□□ -0.18
VRK2Q86Y07 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.94□□□□□ -0.18
VRK2Q86Y07 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.94□□□□□ -0.18
VRK2Q86Y07 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.94□□□□□ -0.18
VRK2Q86Y07 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.94□□□□□ -0.18
VRK2Q86Y07 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VRK2Q86Y07 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.94□□□□□ -0.18
VRK2Q86Y07 AC092552.1-201ENST00000547243 906 ntBASIC13.94□□□□□ -0.18
VRK2Q86Y07 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.94□□□□□ -0.18
VRK2Q86Y07 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.94□□□□□ -0.18
VRK2Q86Y07 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.94□□□□□ -0.18
VRK2Q86Y07 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.94□□□□□ -0.18
VRK2Q86Y07 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.94□□□□□ -0.18
VRK2Q86Y07 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.94□□□□□ -0.18
VRK2Q86Y07 AL132655.2-201ENST00000596276 594 ntBASIC13.94□□□□□ -0.18
VRK2Q86Y07 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK2Q86Y07 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VRK2Q86Y07 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VRK2Q86Y07 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK2Q86Y07 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK2Q86Y07 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK2Q86Y07 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK2Q86Y07 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK2Q86Y07 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.94□□□□□ -0.18
VRK2Q86Y07 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VRK2Q86Y07 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VRK2Q86Y07 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK2Q86Y07 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
VRK2Q86Y07 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
VRK2Q86Y07 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.94□□□□□ -0.18
VRK2Q86Y07 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.93□□□□□ -0.18
VRK2Q86Y07 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VRK2Q86Y07 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.93□□□□□ -0.18
VRK2Q86Y07 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VRK2Q86Y07 AC007541.1-201ENST00000570282 1469 ntBASIC13.93□□□□□ -0.18
VRK2Q86Y07 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.93□□□□□ -0.18
VRK2Q86Y07 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.93□□□□□ -0.18
VRK2Q86Y07 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VRK2Q86Y07 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
VRK2Q86Y07 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
VRK2Q86Y07 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK2Q86Y07 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.93□□□□□ -0.18
VRK2Q86Y07 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK2Q86Y07 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VRK2Q86Y07 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK2Q86Y07 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.93□□□□□ -0.18
VRK2Q86Y07 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VRK2Q86Y07 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.93□□□□□ -0.18
VRK2Q86Y07 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK2Q86Y07 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.93□□□□□ -0.18
VRK2Q86Y07 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK2Q86Y07 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VRK2Q86Y07 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK2Q86Y07 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK2Q86Y07 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.93□□□□□ -0.18
VRK2Q86Y07 MIR770-201ENST00000390219 98 ntBASIC13.93□□□□□ -0.18
VRK2Q86Y07 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK2Q86Y07 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.93□□□□□ -0.18
VRK2Q86Y07 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.93□□□□□ -0.18
VRK2Q86Y07 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.93□□□□□ -0.18
VRK2Q86Y07 DFFBP1-201ENST00000433250 979 ntBASIC13.93□□□□□ -0.18
VRK2Q86Y07 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK2Q86Y07 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.93□□□□□ -0.18
VRK2Q86Y07 AC027796.2-201ENST00000575326 344 ntBASIC13.93□□□□□ -0.18
VRK2Q86Y07 CHCHD2P3-201ENST00000603038 451 ntBASIC13.93□□□□□ -0.18
VRK2Q86Y07 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.93□□□□□ -0.18
VRK2Q86Y07 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK2Q86Y07 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.93□□□□□ -0.18
VRK2Q86Y07 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.93□□□□□ -0.18
VRK2Q86Y07 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.93□□□□□ -0.18
VRK2Q86Y07 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VRK2Q86Y07 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VRK2Q86Y07 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK2Q86Y07 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK2Q86Y07 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.93□□□□□ -0.18
VRK2Q86Y07 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VRK2Q86Y07 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.93□□□□□ -0.18
VRK2Q86Y07 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
VRK2Q86Y07 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK2Q86Y07 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms