Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAPH1Q70E73 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RAPH1Q70E73 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAPH1Q70E73 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAPH1Q70E73 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
RAPH1Q70E73 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAPH1Q70E73 AC087499.5-201ENST00000452760 1342 ntBASIC15.21■□□□□ 0.03
RAPH1Q70E73 AC131212.3-201ENST00000624087 4219 ntBASIC15.21■□□□□ 0.03
RAPH1Q70E73 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAPH1Q70E73 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RAPH1Q70E73 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAPH1Q70E73 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
RAPH1Q70E73 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RAPH1Q70E73 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAPH1Q70E73 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAPH1Q70E73 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAPH1Q70E73 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.21■□□□□ 0.03
RAPH1Q70E73 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAPH1Q70E73 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAPH1Q70E73 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.21■□□□□ 0.03
RAPH1Q70E73 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.21■□□□□ 0.03
RAPH1Q70E73 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAPH1Q70E73 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
RAPH1Q70E73 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.21■□□□□ 0.03
RAPH1Q70E73 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RAPH1Q70E73 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.21■□□□□ 0.03
RAPH1Q70E73 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.21■□□□□ 0.03
RAPH1Q70E73 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.21■□□□□ 0.03
RAPH1Q70E73 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RAPH1Q70E73 AC140878.1-201ENST00000565277 250 ntBASIC15.21■□□□□ 0.03
RAPH1Q70E73 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.21■□□□□ 0.03
RAPH1Q70E73 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RAPH1Q70E73 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAPH1Q70E73 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAPH1Q70E73 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
RAPH1Q70E73 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAPH1Q70E73 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.21■□□□□ 0.03
RAPH1Q70E73 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RAPH1Q70E73 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RAPH1Q70E73 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAPH1Q70E73 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAPH1Q70E73 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAPH1Q70E73 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RAPH1Q70E73 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.21■□□□□ 0.02
RAPH1Q70E73 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
RAPH1Q70E73 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
RAPH1Q70E73 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RAPH1Q70E73 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAPH1Q70E73 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.21■□□□□ 0.02
RAPH1Q70E73 CICP20-201ENST00000443330 2801 ntBASIC15.21■□□□□ 0.02
RAPH1Q70E73 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RAPH1Q70E73 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RAPH1Q70E73 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RAPH1Q70E73 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 PEG13-201ENST00000631594 5667 ntBASIC15.2■□□□□ 0.02
RAPH1Q70E73 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.2■□□□□ 0.02
RAPH1Q70E73 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RAPH1Q70E73 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.2■□□□□ 0.02
RAPH1Q70E73 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RAPH1Q70E73 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.2■□□□□ 0.02
RAPH1Q70E73 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RAPH1Q70E73 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.2■□□□□ 0.02
RAPH1Q70E73 AC113367.3-201ENST00000508316 1912 ntBASIC15.2■□□□□ 0.02
RAPH1Q70E73 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 KRT18P13-201ENST00000400056 1290 ntBASIC15.2■□□□□ 0.02
RAPH1Q70E73 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.2■□□□□ 0.02
RAPH1Q70E73 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.2■□□□□ 0.02
RAPH1Q70E73 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
RAPH1Q70E73 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.2■□□□□ 0.02
RAPH1Q70E73 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.2■□□□□ 0.02
RAPH1Q70E73 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.2■□□□□ 0.02
RAPH1Q70E73 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.2■□□□□ 0.02
RAPH1Q70E73 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RAPH1Q70E73 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.2■□□□□ 0.02
RAPH1Q70E73 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.2■□□□□ 0.02
RAPH1Q70E73 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.2■□□□□ 0.02
RAPH1Q70E73 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.2■□□□□ 0.02
RAPH1Q70E73 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.2■□□□□ 0.02
RAPH1Q70E73 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 AC097359.2-201ENST00000604992 2389 ntBASIC15.2■□□□□ 0.02
RAPH1Q70E73 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms