Protein–RNA interactions for Protein: Q3C1V8

BSX, Brain-specific homeobox protein homolog, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BSXQ3C1V8 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
BSXQ3C1V8 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BSXQ3C1V8 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BSXQ3C1V8 MIR4469-201ENST00000583919 79 ntBASIC12.24□□□□□ -0.45
BSXQ3C1V8 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.24□□□□□ -0.45
BSXQ3C1V8 AC004835.2-201ENST00000603762 682 ntBASIC12.24□□□□□ -0.45
BSXQ3C1V8 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.24□□□□□ -0.45
BSXQ3C1V8 AC025181.2-201ENST00000606994 802 ntBASIC12.24□□□□□ -0.45
BSXQ3C1V8 AP001059.3-201ENST00000619053 235 ntBASIC12.24□□□□□ -0.45
BSXQ3C1V8 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.24□□□□□ -0.45
BSXQ3C1V8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.24□□□□□ -0.45
BSXQ3C1V8 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.24□□□□□ -0.45
BSXQ3C1V8 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BSXQ3C1V8 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BSXQ3C1V8 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.24□□□□□ -0.45
BSXQ3C1V8 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
BSXQ3C1V8 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BSXQ3C1V8 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BSXQ3C1V8 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BSXQ3C1V8 AC099521.3-201ENST00000624251 2938 ntBASIC12.24□□□□□ -0.45
BSXQ3C1V8 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BSXQ3C1V8 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BSXQ3C1V8 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BSXQ3C1V8 AC027612.1-201ENST00000445234 2395 ntBASIC12.23□□□□□ -0.45
BSXQ3C1V8 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
BSXQ3C1V8 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BSXQ3C1V8 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BSXQ3C1V8 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BSXQ3C1V8 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BSXQ3C1V8 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BSXQ3C1V8 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BSXQ3C1V8 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.23□□□□□ -0.45
BSXQ3C1V8 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
BSXQ3C1V8 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BSXQ3C1V8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BSXQ3C1V8 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
BSXQ3C1V8 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BSXQ3C1V8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BSXQ3C1V8 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 AL512356.2-201ENST00000546955 174 ntBASIC12.23□□□□□ -0.45
BSXQ3C1V8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 MIR4453-201ENST00000584019 89 ntBASIC12.23□□□□□ -0.45
BSXQ3C1V8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 AL671883.3-201ENST00000603274 991 ntBASIC12.23□□□□□ -0.45
BSXQ3C1V8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.23□□□□□ -0.45
BSXQ3C1V8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 LINC00628-201ENST00000628516 1289 ntBASIC12.23□□□□□ -0.45
BSXQ3C1V8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BSXQ3C1V8 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 AL033527.5-202ENST00000641632 1098 ntBASIC12.23□□□□□ -0.45
BSXQ3C1V8 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
BSXQ3C1V8 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BSXQ3C1V8 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BSXQ3C1V8 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
BSXQ3C1V8 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BSXQ3C1V8 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BSXQ3C1V8 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BSXQ3C1V8 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BSXQ3C1V8 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BSXQ3C1V8 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BSXQ3C1V8 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
BSXQ3C1V8 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BSXQ3C1V8 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
BSXQ3C1V8 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.22□□□□□ -0.45
BSXQ3C1V8 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.22□□□□□ -0.45
BSXQ3C1V8 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.22□□□□□ -0.45
BSXQ3C1V8 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BSXQ3C1V8 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.22□□□□□ -0.45
BSXQ3C1V8 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
BSXQ3C1V8 AC089987.1-201ENST00000551654 2209 ntBASIC12.22□□□□□ -0.45
BSXQ3C1V8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BSXQ3C1V8 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.22□□□□□ -0.45
BSXQ3C1V8 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
BSXQ3C1V8 CETN4P-206ENST00000642099 2168 ntBASIC12.22□□□□□ -0.45
BSXQ3C1V8 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BSXQ3C1V8 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
BSXQ3C1V8 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.22□□□□□ -0.45
BSXQ3C1V8 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms