Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.05□□□□□ -0.16
CD47Q08722 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
CD47Q08722 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.05□□□□□ -0.16
CD47Q08722 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.05□□□□□ -0.16
CD47Q08722 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.05□□□□□ -0.16
CD47Q08722 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD47Q08722 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD47Q08722 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.05□□□□□ -0.16
CD47Q08722 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.05□□□□□ -0.16
CD47Q08722 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD47Q08722 AL356585.2-201ENST00000625078 2396 ntBASIC14.05□□□□□ -0.16
CD47Q08722 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CD47Q08722 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CD47Q08722 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD47Q08722 KRT8P12-202ENST00000472924 1397 ntBASIC14.05□□□□□ -0.16
CD47Q08722 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD47Q08722 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CD47Q08722 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD47Q08722 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.05□□□□□ -0.16
CD47Q08722 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD47Q08722 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.05□□□□□ -0.16
CD47Q08722 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD47Q08722 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.05□□□□□ -0.16
CD47Q08722 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD47Q08722 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD47Q08722 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CD47Q08722 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD47Q08722 AC007787.1-201ENST00000588095 1583 ntBASIC14.05□□□□□ -0.16
CD47Q08722 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD47Q08722 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.04□□□□□ -0.16
CD47Q08722 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CD47Q08722 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.04□□□□□ -0.16
CD47Q08722 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CD47Q08722 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.04□□□□□ -0.16
CD47Q08722 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.04□□□□□ -0.16
CD47Q08722 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CD47Q08722 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.04□□□□□ -0.16
CD47Q08722 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.04□□□□□ -0.16
CD47Q08722 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.04□□□□□ -0.16
CD47Q08722 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.04□□□□□ -0.16
CD47Q08722 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
CD47Q08722 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.04□□□□□ -0.16
CD47Q08722 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.04□□□□□ -0.16
CD47Q08722 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.04□□□□□ -0.16
CD47Q08722 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.04□□□□□ -0.16
CD47Q08722 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 AC069262.1-201ENST00000539058 672 ntBASIC14.04□□□□□ -0.16
CD47Q08722 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.04□□□□□ -0.16
CD47Q08722 AL512356.2-201ENST00000546955 174 ntBASIC14.04□□□□□ -0.16
CD47Q08722 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.04□□□□□ -0.16
CD47Q08722 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.04□□□□□ -0.16
CD47Q08722 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.04□□□□□ -0.16
CD47Q08722 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.04□□□□□ -0.16
CD47Q08722 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CD47Q08722 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.04□□□□□ -0.16
CD47Q08722 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.04□□□□□ -0.16
CD47Q08722 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD47Q08722 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.03□□□□□ -0.16
CD47Q08722 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.03□□□□□ -0.16
CD47Q08722 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD47Q08722 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD47Q08722 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD47Q08722 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD47Q08722 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.03□□□□□ -0.16
CD47Q08722 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD47Q08722 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.03□□□□□ -0.16
CD47Q08722 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD47Q08722 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD47Q08722 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD47Q08722 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD47Q08722 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms