Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 AC092053.3-201ENST00000641308 4975 ntBASIC11.62□□□□□ -0.55
HIST1H1AQ02539 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 AC099521.3-201ENST00000624251 2938 ntBASIC11.62□□□□□ -0.55
HIST1H1AQ02539 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 DNAJB3-202ENST00000449667 1266 ntBASIC11.62□□□□□ -0.55
HIST1H1AQ02539 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 AC011467.4-201ENST00000594891 528 ntBASIC11.62□□□□□ -0.55
HIST1H1AQ02539 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 GPER1-207ENST00000619052 571 ntTSL 2 BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 Z92544.3-201ENST00000624747 417 ntBASIC11.62□□□□□ -0.55
HIST1H1AQ02539 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HIST1H1AQ02539 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 TUBB3P1-201ENST00000405796 1332 ntBASIC11.61□□□□□ -0.55
HIST1H1AQ02539 SLC6A6P1-201ENST00000413933 1850 ntBASIC11.61□□□□□ -0.55
HIST1H1AQ02539 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 AC136759.1-202ENST00000530858 2194 ntBASIC11.61□□□□□ -0.55
HIST1H1AQ02539 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 AC074338.1-201ENST00000416825 156 ntBASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms