Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL1Q00532 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
CDKL1Q00532 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL1Q00532 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL1Q00532 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.86□□□□□ -0.03
CDKL1Q00532 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.86□□□□□ -0.03
CDKL1Q00532 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL1Q00532 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL1Q00532 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL1Q00532 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CDKL1Q00532 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL1Q00532 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.85□□□□□ -0.03
CDKL1Q00532 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL1Q00532 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL1Q00532 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CDKL1Q00532 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL1Q00532 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.85□□□□□ -0.03
CDKL1Q00532 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL1Q00532 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.85□□□□□ -0.03
CDKL1Q00532 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL1Q00532 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.85□□□□□ -0.03
CDKL1Q00532 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL1Q00532 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.85□□□□□ -0.03
CDKL1Q00532 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL1Q00532 C1QBPP1-201ENST00000400117 770 ntBASIC14.85□□□□□ -0.03
CDKL1Q00532 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.85□□□□□ -0.03
CDKL1Q00532 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.85□□□□□ -0.03
CDKL1Q00532 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CDKL1Q00532 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.85□□□□□ -0.03
CDKL1Q00532 AC123567.1-201ENST00000548294 1261 ntBASIC14.85□□□□□ -0.03
CDKL1Q00532 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.85□□□□□ -0.03
CDKL1Q00532 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.85□□□□□ -0.03
CDKL1Q00532 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CDKL1Q00532 AL132655.2-201ENST00000596276 594 ntBASIC14.85□□□□□ -0.03
CDKL1Q00532 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
CDKL1Q00532 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL1Q00532 CICP17-201ENST00000418553 2377 ntBASIC14.85□□□□□ -0.03
CDKL1Q00532 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CDKL1Q00532 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL1Q00532 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL1Q00532 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CDKL1Q00532 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.85□□□□□ -0.03
CDKL1Q00532 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL1Q00532 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL1Q00532 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CDKL1Q00532 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CDKL1Q00532 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CDKL1Q00532 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL1Q00532 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL1Q00532 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL1Q00532 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL1Q00532 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL1Q00532 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL1Q00532 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL1Q00532 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.84□□□□□ -0.03
CDKL1Q00532 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
CDKL1Q00532 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL1Q00532 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CDKL1Q00532 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CDKL1Q00532 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.84□□□□□ -0.03
CDKL1Q00532 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL1Q00532 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
CDKL1Q00532 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CDKL1Q00532 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL1Q00532 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL1Q00532 BCRP1-201ENST00000444246 691 ntBASIC14.84□□□□□ -0.03
CDKL1Q00532 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CDKL1Q00532 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL1Q00532 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL1Q00532 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.84□□□□□ -0.03
CDKL1Q00532 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.84□□□□□ -0.03
CDKL1Q00532 SPCS2P1-201ENST00000561636 679 ntBASIC14.84□□□□□ -0.03
CDKL1Q00532 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.84□□□□□ -0.03
CDKL1Q00532 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.84□□□□□ -0.03
CDKL1Q00532 AC004233.3-201ENST00000607794 1269 ntBASIC14.84□□□□□ -0.03
CDKL1Q00532 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CDKL1Q00532 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.84□□□□□ -0.03
CDKL1Q00532 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.84□□□□□ -0.03
CDKL1Q00532 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CDKL1Q00532 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.84□□□□□ -0.03
CDKL1Q00532 AL603764.1-201ENST00000636452 321 ntBASIC14.84□□□□□ -0.03
CDKL1Q00532 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL1Q00532 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL1Q00532 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL1Q00532 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL1Q00532 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL1Q00532 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL1Q00532 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL1Q00532 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL1Q00532 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL1Q00532 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL1Q00532 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL1Q00532 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL1Q00532 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL1Q00532 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL1Q00532 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.84□□□□□ -0.03
CDKL1Q00532 MBLAC2-202ENST00000514906 1936 ntBASIC14.84□□□□□ -0.03
CDKL1Q00532 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.84□□□□□ -0.03
CDKL1Q00532 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.84□□□□□ -0.03
CDKL1Q00532 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms