Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HTRA3P83110 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HTRA3P83110 AC007952.5-201ENST00000572818 1486 ntBASIC16.95■□□□□ 0.3
HTRA3P83110 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HTRA3P83110 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC16.95■□□□□ 0.3
HTRA3P83110 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
HTRA3P83110 MIR648-201ENST00000385046 94 ntBASIC16.95■□□□□ 0.3
HTRA3P83110 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC16.95■□□□□ 0.3
HTRA3P83110 HNRNPABP1-201ENST00000406003 734 ntBASIC16.95■□□□□ 0.3
HTRA3P83110 FTH1P18-201ENST00000412071 549 ntBASIC16.95■□□□□ 0.3
HTRA3P83110 HNRNPA1P59-201ENST00000430583 918 ntBASIC16.95■□□□□ 0.3
HTRA3P83110 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HTRA3P83110 RNASEH2CP1-201ENST00000454281 502 ntBASIC16.95■□□□□ 0.3
HTRA3P83110 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HTRA3P83110 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HTRA3P83110 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC16.95■□□□□ 0.3
HTRA3P83110 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC16.95■□□□□ 0.3
HTRA3P83110 DLK1-205ENST00000556051 469 ntTSL 2 BASIC16.95■□□□□ 0.3
HTRA3P83110 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC16.95■□□□□ 0.3
HTRA3P83110 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC16.95■□□□□ 0.3
HTRA3P83110 MIR4746-201ENST00000579802 71 ntBASIC16.95■□□□□ 0.3
HTRA3P83110 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC16.95■□□□□ 0.3
HTRA3P83110 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.95■□□□□ 0.3
HTRA3P83110 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HTRA3P83110 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
HTRA3P83110 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.95■□□□□ 0.3
HTRA3P83110 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HTRA3P83110 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HTRA3P83110 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.95■□□□□ 0.3
HTRA3P83110 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HTRA3P83110 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HTRA3P83110 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HTRA3P83110 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.95■□□□□ 0.3
HTRA3P83110 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HTRA3P83110 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
HTRA3P83110 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HTRA3P83110 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HTRA3P83110 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
HTRA3P83110 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HTRA3P83110 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.94■□□□□ 0.3
HTRA3P83110 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HTRA3P83110 AC018470.1-201ENST00000624790 3129 ntBASIC16.94■□□□□ 0.3
HTRA3P83110 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HTRA3P83110 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HTRA3P83110 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HTRA3P83110 AL365181.1-201ENST00000564032 1828 ntBASIC16.94■□□□□ 0.3
HTRA3P83110 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HTRA3P83110 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HTRA3P83110 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HTRA3P83110 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HTRA3P83110 OR7E115P-201ENST00000382617 1024 ntBASIC16.94■□□□□ 0.3
HTRA3P83110 MIR181D-201ENST00000384853 137 ntBASIC16.94■□□□□ 0.3
HTRA3P83110 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
HTRA3P83110 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC16.94■□□□□ 0.3
HTRA3P83110 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC16.94■□□□□ 0.3
HTRA3P83110 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC16.94■□□□□ 0.3
HTRA3P83110 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC16.94■□□□□ 0.3
HTRA3P83110 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC16.94■□□□□ 0.3
HTRA3P83110 AP000244.1-201ENST00000424582 201 ntBASIC16.94■□□□□ 0.3
HTRA3P83110 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC16.94■□□□□ 0.3
HTRA3P83110 AC087203.1-201ENST00000532111 1181 ntBASIC16.94■□□□□ 0.3
HTRA3P83110 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
HTRA3P83110 BX088702.1-201ENST00000610784 235 ntBASIC16.94■□□□□ 0.3
HTRA3P83110 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HTRA3P83110 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
HTRA3P83110 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HTRA3P83110 AC026471.1-201ENST00000564629 3026 ntBASIC16.94■□□□□ 0.3
HTRA3P83110 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.94■□□□□ 0.3
HTRA3P83110 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HTRA3P83110 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HTRA3P83110 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HTRA3P83110 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.94■□□□□ 0.3
HTRA3P83110 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HTRA3P83110 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.94■□□□□ 0.3
HTRA3P83110 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HTRA3P83110 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HTRA3P83110 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
HTRA3P83110 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HTRA3P83110 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HTRA3P83110 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
HTRA3P83110 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HTRA3P83110 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.93■□□□□ 0.3
HTRA3P83110 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HTRA3P83110 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HTRA3P83110 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
HTRA3P83110 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HTRA3P83110 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
HTRA3P83110 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HTRA3P83110 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HTRA3P83110 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HTRA3P83110 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC16.93■□□□□ 0.3
HTRA3P83110 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
HTRA3P83110 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HTRA3P83110 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
HTRA3P83110 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HTRA3P83110 RN7SL128P-201ENST00000467883 305 ntBASIC16.93■□□□□ 0.3
HTRA3P83110 AC022447.5-201ENST00000504817 392 ntBASIC16.93■□□□□ 0.3
HTRA3P83110 CCNL2P1-201ENST00000512846 969 ntBASIC16.93■□□□□ 0.3
HTRA3P83110 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC16.93■□□□□ 0.3
HTRA3P83110 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms