Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC9.64□□□□□ -0.87
UBE2AP49459 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
UBE2AP49459 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
UBE2AP49459 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 LINC01101-201ENST00000622953 1884 ntBASIC9.64□□□□□ -0.87
UBE2AP49459 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 WASH3P-207ENST00000560956 1394 ntBASIC9.63□□□□□ -0.87
UBE2AP49459 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC9.63□□□□□ -0.87
UBE2AP49459 AC005252.3-201ENST00000623855 2258 ntBASIC9.63□□□□□ -0.87
UBE2AP49459 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC9.63□□□□□ -0.87
UBE2AP49459 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
UBE2AP49459 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBE2AP49459 CELP-203ENST00000624767 2414 ntTSL 5 BASIC9.63□□□□□ -0.87
UBE2AP49459 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBE2AP49459 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC9.63□□□□□ -0.87
UBE2AP49459 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBE2AP49459 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBE2AP49459 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBE2AP49459 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC9.63□□□□□ -0.87
UBE2AP49459 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBE2AP49459 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBE2AP49459 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC9.63□□□□□ -0.87
UBE2AP49459 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
UBE2AP49459 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
UBE2AP49459 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
UBE2AP49459 CENPM-205ENST00000404067 905 ntTSL 3 BASIC9.63□□□□□ -0.87
UBE2AP49459 CENPM-206ENST00000407253 818 ntTSL 2 BASIC9.63□□□□□ -0.87
UBE2AP49459 RPL37AP1-201ENST00000412502 279 ntBASIC9.63□□□□□ -0.87
UBE2AP49459 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC9.63□□□□□ -0.87
UBE2AP49459 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC9.63□□□□□ -0.87
UBE2AP49459 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC9.63□□□□□ -0.87
UBE2AP49459 HIST3H2BA-201ENST00000436555 524 ntBASIC9.63□□□□□ -0.87
UBE2AP49459 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC9.63□□□□□ -0.87
UBE2AP49459 KRT18P43-201ENST00000469825 1281 ntBASIC9.63□□□□□ -0.87
UBE2AP49459 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC9.63□□□□□ -0.87
UBE2AP49459 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC9.63□□□□□ -0.87
UBE2AP49459 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC9.63□□□□□ -0.87
UBE2AP49459 SDHAP3-202ENST00000515467 728 ntBASIC9.63□□□□□ -0.87
UBE2AP49459 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC9.63□□□□□ -0.87
UBE2AP49459 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC9.63□□□□□ -0.87
UBE2AP49459 AC109322.1-201ENST00000524499 1264 ntBASIC9.63□□□□□ -0.87
UBE2AP49459 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC9.63□□□□□ -0.87
UBE2AP49459 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC9.63□□□□□ -0.87
UBE2AP49459 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC9.63□□□□□ -0.87
UBE2AP49459 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBE2AP49459 AC140878.1-201ENST00000565277 250 ntBASIC9.63□□□□□ -0.87
UBE2AP49459 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBE2AP49459 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
UBE2AP49459 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
UBE2AP49459 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
UBE2AP49459 AC015656.1-201ENST00000624209 3578 ntBASIC9.63□□□□□ -0.87
UBE2AP49459 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBE2AP49459 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBE2AP49459 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
UBE2AP49459 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC9.63□□□□□ -0.87
UBE2AP49459 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
UBE2AP49459 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBE2AP49459 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBE2AP49459 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBE2AP49459 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBE2AP49459 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBE2AP49459 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBE2AP49459 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC9.63□□□□□ -0.87
UBE2AP49459 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC9.63□□□□□ -0.87
UBE2AP49459 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
UBE2AP49459 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC9.63□□□□□ -0.87
UBE2AP49459 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC9.63□□□□□ -0.87
UBE2AP49459 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBE2AP49459 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBE2AP49459 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
UBE2AP49459 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC9.63□□□□□ -0.87
UBE2AP49459 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC9.63□□□□□ -0.87
UBE2AP49459 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
UBE2AP49459 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
UBE2AP49459 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC9.62□□□□□ -0.87
UBE2AP49459 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
UBE2AP49459 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
UBE2AP49459 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC9.62□□□□□ -0.87
UBE2AP49459 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
UBE2AP49459 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
UBE2AP49459 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
UBE2AP49459 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
UBE2AP49459 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC9.62□□□□□ -0.87
UBE2AP49459 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC9.62□□□□□ -0.87
UBE2AP49459 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
UBE2AP49459 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC9.62□□□□□ -0.87
UBE2AP49459 STK33-217ENST00000534493 1895 ntTSL 2 BASIC9.62□□□□□ -0.87
UBE2AP49459 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
UBE2AP49459 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC9.62□□□□□ -0.87
UBE2AP49459 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
UBE2AP49459 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms