Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSNK1A1P48729 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CSNK1A1P48729 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSNK1A1P48729 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSNK1A1P48729 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSNK1A1P48729 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSNK1A1P48729 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 AC007686.3-201ENST00000619017 3487 ntBASIC13.43□□□□□ -0.26
CSNK1A1P48729 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 AC093433.1-201ENST00000458048 571 ntBASIC13.43□□□□□ -0.26
CSNK1A1P48729 RN7SL752P-201ENST00000463779 287 ntBASIC13.43□□□□□ -0.26
CSNK1A1P48729 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 MIR3197-201ENST00000582241 73 ntBASIC13.43□□□□□ -0.26
CSNK1A1P48729 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 AC025048.6-201ENST00000634326 1161 ntBASIC13.43□□□□□ -0.26
CSNK1A1P48729 AL603764.1-201ENST00000636452 321 ntBASIC13.43□□□□□ -0.26
CSNK1A1P48729 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CSNK1A1P48729 AC055811.4-201ENST00000624039 1754 ntBASIC13.43□□□□□ -0.26
CSNK1A1P48729 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
CSNK1A1P48729 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.42□□□□□ -0.26
CSNK1A1P48729 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CSNK1A1P48729 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.42□□□□□ -0.26
CSNK1A1P48729 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CSNK1A1P48729 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CSNK1A1P48729 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CSNK1A1P48729 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSNK1A1P48729 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSNK1A1P48729 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSNK1A1P48729 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CSNK1A1P48729 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CSNK1A1P48729 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
CSNK1A1P48729 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSNK1A1P48729 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.42□□□□□ -0.26
CSNK1A1P48729 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSNK1A1P48729 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CSNK1A1P48729 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.42□□□□□ -0.26
CSNK1A1P48729 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CSNK1A1P48729 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CSNK1A1P48729 ACTBP8-201ENST00000403258 1108 ntBASIC13.42□□□□□ -0.26
CSNK1A1P48729 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.42□□□□□ -0.26
CSNK1A1P48729 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms