Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6CP48668 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6CP48668 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.66□□□□□ -0.06
KRT6CP48668 AC113367.3-201ENST00000508316 1912 ntBASIC14.66□□□□□ -0.06
KRT6CP48668 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.66□□□□□ -0.06
KRT6CP48668 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
KRT6CP48668 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6CP48668 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
KRT6CP48668 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
KRT6CP48668 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
KRT6CP48668 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6CP48668 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
KRT6CP48668 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
KRT6CP48668 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.66□□□□□ -0.06
KRT6CP48668 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6CP48668 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6CP48668 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
KRT6CP48668 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.66□□□□□ -0.06
KRT6CP48668 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6CP48668 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6CP48668 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
KRT6CP48668 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6CP48668 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.66□□□□□ -0.06
KRT6CP48668 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.66□□□□□ -0.06
KRT6CP48668 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6CP48668 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.66□□□□□ -0.06
KRT6CP48668 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.66□□□□□ -0.06
KRT6CP48668 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6CP48668 VDAC1P7-201ENST00000462417 847 ntBASIC14.66□□□□□ -0.06
KRT6CP48668 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.66□□□□□ -0.06
KRT6CP48668 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.66□□□□□ -0.06
KRT6CP48668 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.66□□□□□ -0.06
KRT6CP48668 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.66□□□□□ -0.06
KRT6CP48668 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.66□□□□□ -0.06
KRT6CP48668 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6CP48668 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
KRT6CP48668 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6CP48668 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.66□□□□□ -0.06
KRT6CP48668 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6CP48668 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6CP48668 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.66□□□□□ -0.06
KRT6CP48668 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.66□□□□□ -0.06
KRT6CP48668 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
KRT6CP48668 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6CP48668 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.66□□□□□ -0.06
KRT6CP48668 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.66□□□□□ -0.06
KRT6CP48668 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6CP48668 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
KRT6CP48668 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6CP48668 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6CP48668 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6CP48668 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6CP48668 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.65□□□□□ -0.06
KRT6CP48668 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.65□□□□□ -0.06
KRT6CP48668 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6CP48668 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
KRT6CP48668 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
KRT6CP48668 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6CP48668 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.65□□□□□ -0.06
KRT6CP48668 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.65□□□□□ -0.06
KRT6CP48668 AC018665.1-201ENST00000622927 1362 ntBASIC14.65□□□□□ -0.06
KRT6CP48668 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6CP48668 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
KRT6CP48668 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6CP48668 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6CP48668 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
KRT6CP48668 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.65□□□□□ -0.06
KRT6CP48668 HLA-K-203ENST00000430151 1046 ntBASIC14.65□□□□□ -0.06
KRT6CP48668 AC093214.1-201ENST00000511688 1107 ntBASIC14.65□□□□□ -0.06
KRT6CP48668 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.65□□□□□ -0.06
KRT6CP48668 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6CP48668 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6CP48668 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.65□□□□□ -0.06
KRT6CP48668 AC023310.3-201ENST00000557027 670 ntBASIC14.65□□□□□ -0.06
KRT6CP48668 AC100756.1-201ENST00000562736 682 ntBASIC14.65□□□□□ -0.06
KRT6CP48668 AC138749.3-201ENST00000567691 622 ntBASIC14.65□□□□□ -0.06
KRT6CP48668 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.65□□□□□ -0.06
KRT6CP48668 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
KRT6CP48668 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.65□□□□□ -0.06
KRT6CP48668 AC116165.1-201ENST00000611806 668 ntBASIC14.65□□□□□ -0.06
KRT6CP48668 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6CP48668 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6CP48668 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6CP48668 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6CP48668 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6CP48668 AL137783.1-201ENST00000623494 1896 ntBASIC14.65□□□□□ -0.06
KRT6CP48668 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
KRT6CP48668 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
KRT6CP48668 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.65□□□□□ -0.06
KRT6CP48668 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.65□□□□□ -0.06
KRT6CP48668 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6CP48668 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6CP48668 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6CP48668 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.65□□□□□ -0.06
KRT6CP48668 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6CP48668 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
KRT6CP48668 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
KRT6CP48668 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.07
KRT6CP48668 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.64□□□□□ -0.07
KRT6CP48668 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms