Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT2P35908 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT2P35908 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT2P35908 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
KRT2P35908 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
KRT2P35908 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT2P35908 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT2P35908 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
KRT2P35908 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT2P35908 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT2P35908 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT2P35908 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT2P35908 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT2P35908 AC003102.2-201ENST00000589195 1469 ntBASIC17.24■□□□□ 0.35
KRT2P35908 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
KRT2P35908 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT2P35908 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT2P35908 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT2P35908 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT2P35908 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT2P35908 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT2P35908 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT2P35908 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.23■□□□□ 0.35
KRT2P35908 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT2P35908 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT2P35908 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT2P35908 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT2P35908 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT2P35908 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT2P35908 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
KRT2P35908 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT2P35908 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT2P35908 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT2P35908 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.23■□□□□ 0.35
KRT2P35908 POM121L8P-201ENST00000417732 1281 ntBASIC17.23■□□□□ 0.35
KRT2P35908 TLE1P1-201ENST00000422965 589 ntBASIC17.23■□□□□ 0.35
KRT2P35908 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.23■□□□□ 0.35
KRT2P35908 POM121L9P-203ENST00000441984 1285 ntBASIC17.23■□□□□ 0.35
KRT2P35908 AC025279.2-201ENST00000569730 653 ntBASIC17.23■□□□□ 0.35
KRT2P35908 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT2P35908 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
KRT2P35908 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.23■□□□□ 0.35
KRT2P35908 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT2P35908 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT2P35908 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.23■□□□□ 0.35
KRT2P35908 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT2P35908 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT2P35908 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT2P35908 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
KRT2P35908 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
KRT2P35908 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT2P35908 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
KRT2P35908 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT2P35908 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT2P35908 CLUHP2-201ENST00000426660 1303 ntBASIC17.22■□□□□ 0.35
KRT2P35908 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT2P35908 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT2P35908 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT2P35908 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT2P35908 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT2P35908 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT2P35908 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
KRT2P35908 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.22■□□□□ 0.35
KRT2P35908 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT2P35908 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KRT2P35908 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT2P35908 AC113367.3-201ENST00000508316 1912 ntBASIC17.22■□□□□ 0.35
KRT2P35908 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KRT2P35908 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT2P35908 AC092933.1-201ENST00000393644 945 ntBASIC17.22■□□□□ 0.35
KRT2P35908 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT2P35908 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.22■□□□□ 0.35
KRT2P35908 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.22■□□□□ 0.35
KRT2P35908 AC005225.4-201ENST00000557330 545 ntBASIC17.22■□□□□ 0.35
KRT2P35908 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.22■□□□□ 0.35
KRT2P35908 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT2P35908 BTNL10-201ENST00000595971 695 ntBASIC17.22■□□□□ 0.35
KRT2P35908 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.22■□□□□ 0.35
KRT2P35908 AL022328.1-201ENST00000610050 478 ntBASIC17.22■□□□□ 0.35
KRT2P35908 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT2P35908 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT2P35908 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
KRT2P35908 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT2P35908 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.22■□□□□ 0.35
KRT2P35908 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KRT2P35908 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
KRT2P35908 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
KRT2P35908 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT2P35908 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT2P35908 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
KRT2P35908 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT2P35908 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT2P35908 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
KRT2P35908 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.21■□□□□ 0.35
KRT2P35908 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT2P35908 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT2P35908 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
KRT2P35908 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT2P35908 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.21■□□□□ 0.35
KRT2P35908 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms