Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN3P20807 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN3P20807 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN3P20807 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN3P20807 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.55□□□□□ -0.08
CAPN3P20807 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.55□□□□□ -0.08
CAPN3P20807 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CAPN3P20807 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN3P20807 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN3P20807 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.55□□□□□ -0.08
CAPN3P20807 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN3P20807 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN3P20807 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN3P20807 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CAPN3P20807 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN3P20807 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CAPN3P20807 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN3P20807 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN3P20807 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.55□□□□□ -0.08
CAPN3P20807 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CAPN3P20807 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.55□□□□□ -0.08
CAPN3P20807 RPL37AP1-201ENST00000412502 279 ntBASIC14.55□□□□□ -0.08
CAPN3P20807 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.55□□□□□ -0.08
CAPN3P20807 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.55□□□□□ -0.08
CAPN3P20807 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.55□□□□□ -0.08
CAPN3P20807 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
CAPN3P20807 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.55□□□□□ -0.08
CAPN3P20807 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.55□□□□□ -0.08
CAPN3P20807 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CAPN3P20807 AC027369.6-201ENST00000525520 931 ntBASIC14.55□□□□□ -0.08
CAPN3P20807 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CAPN3P20807 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.55□□□□□ -0.08
CAPN3P20807 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.55□□□□□ -0.08
CAPN3P20807 AC073592.8-201ENST00000624126 511 ntBASIC14.55□□□□□ -0.08
CAPN3P20807 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN3P20807 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN3P20807 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN3P20807 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.55□□□□□ -0.08
CAPN3P20807 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.55□□□□□ -0.08
CAPN3P20807 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CAPN3P20807 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN3P20807 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN3P20807 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN3P20807 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.55□□□□□ -0.08
CAPN3P20807 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN3P20807 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CAPN3P20807 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN3P20807 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN3P20807 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
CAPN3P20807 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CAPN3P20807 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN3P20807 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.54□□□□□ -0.08
CAPN3P20807 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 AL354702.1-201ENST00000442006 1960 ntBASIC14.54□□□□□ -0.08
CAPN3P20807 AC011474.4-201ENST00000623523 2076 ntBASIC14.54□□□□□ -0.08
CAPN3P20807 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CAPN3P20807 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.54□□□□□ -0.08
CAPN3P20807 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.54□□□□□ -0.08
CAPN3P20807 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.54□□□□□ -0.08
CAPN3P20807 AL512361.1-201ENST00000554200 418 ntBASIC14.54□□□□□ -0.08
CAPN3P20807 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.54□□□□□ -0.08
CAPN3P20807 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.54□□□□□ -0.08
CAPN3P20807 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.54□□□□□ -0.08
CAPN3P20807 AL590560.3-201ENST00000623350 461 ntBASIC14.54□□□□□ -0.08
CAPN3P20807 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CAPN3P20807 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.54□□□□□ -0.08
CAPN3P20807 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 AC022144.1-201ENST00000602255 1580 ntBASIC14.54□□□□□ -0.08
CAPN3P20807 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CAPN3P20807 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CAPN3P20807 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.54□□□□□ -0.08
CAPN3P20807 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.54□□□□□ -0.08
CAPN3P20807 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.54□□□□□ -0.08
CAPN3P20807 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.54□□□□□ -0.08
CAPN3P20807 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.54□□□□□ -0.08
CAPN3P20807 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms