Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAB3BP20337 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB3BP20337 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB3BP20337 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RAB3BP20337 AC079140.1-201ENST00000508039 487 ntBASIC13.26□□□□□ -0.29
RAB3BP20337 AGGF1P1-201ENST00000509500 2073 ntBASIC13.26□□□□□ -0.29
RAB3BP20337 RNA5SP419-201ENST00000515908 135 ntBASIC13.26□□□□□ -0.29
RAB3BP20337 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB3BP20337 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
RAB3BP20337 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB3BP20337 SLC25A39P2-201ENST00000537614 270 ntBASIC13.26□□□□□ -0.29
RAB3BP20337 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
RAB3BP20337 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB3BP20337 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.26□□□□□ -0.29
RAB3BP20337 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.26□□□□□ -0.29
RAB3BP20337 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.26□□□□□ -0.29
RAB3BP20337 KRT8P24-201ENST00000560290 1559 ntBASIC13.26□□□□□ -0.29
RAB3BP20337 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB3BP20337 AC145285.3-201ENST00000564603 959 ntBASIC13.26□□□□□ -0.29
RAB3BP20337 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.26□□□□□ -0.29
RAB3BP20337 AC005562.1-201ENST00000583030 3219 ntBASIC13.26□□□□□ -0.29
RAB3BP20337 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.26□□□□□ -0.29
RAB3BP20337 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB3BP20337 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.26□□□□□ -0.29
RAB3BP20337 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAB3BP20337 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
RAB3BP20337 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
RAB3BP20337 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
RAB3BP20337 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RAB3BP20337 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RAB3BP20337 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAB3BP20337 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 AC105206.1-202ENST00000314927 2368 ntBASIC13.25□□□□□ -0.29
RAB3BP20337 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RAB3BP20337 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
RAB3BP20337 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.25□□□□□ -0.29
RAB3BP20337 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 INE2-201ENST00000630399 1874 ntBASIC13.25□□□□□ -0.29
RAB3BP20337 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
RAB3BP20337 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.25□□□□□ -0.29
RAB3BP20337 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
RAB3BP20337 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
RAB3BP20337 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.25□□□□□ -0.29
RAB3BP20337 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.25□□□□□ -0.29
RAB3BP20337 ADH5P3-201ENST00000433842 1137 ntBASIC13.25□□□□□ -0.29
RAB3BP20337 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.25□□□□□ -0.29
RAB3BP20337 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.25□□□□□ -0.29
RAB3BP20337 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RAB3BP20337 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.25□□□□□ -0.29
RAB3BP20337 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.25□□□□□ -0.29
RAB3BP20337 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.25□□□□□ -0.29
RAB3BP20337 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 PPT1-213ENST00000641319 2388 ntBASIC13.25□□□□□ -0.29
RAB3BP20337 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RAB3BP20337 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.25□□□□□ -0.29
RAB3BP20337 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.25□□□□□ -0.29
RAB3BP20337 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RAB3BP20337 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
RAB3BP20337 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.25□□□□□ -0.29
RAB3BP20337 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
RAB3BP20337 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.25□□□□□ -0.29
RAB3BP20337 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB3BP20337 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAB3BP20337 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
RAB3BP20337 Z82170.1-201ENST00000625081 3192 ntBASIC13.24□□□□□ -0.29
RAB3BP20337 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB3BP20337 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB3BP20337 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB3BP20337 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB3BP20337 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RAB3BP20337 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB3BP20337 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.24□□□□□ -0.29
RAB3BP20337 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.24□□□□□ -0.29
RAB3BP20337 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
RAB3BP20337 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms