Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.27□□□□□ -0.29
ATF1P18846 AL138828.2-201ENST00000615812 383 ntBASIC13.27□□□□□ -0.29
ATF1P18846 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
ATF1P18846 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.27□□□□□ -0.29
ATF1P18846 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.27□□□□□ -0.29
ATF1P18846 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
ATF1P18846 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.27□□□□□ -0.29
ATF1P18846 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ATF1P18846 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ATF1P18846 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ATF1P18846 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ATF1P18846 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ATF1P18846 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ATF1P18846 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ATF1P18846 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
ATF1P18846 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.27□□□□□ -0.29
ATF1P18846 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ATF1P18846 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ATF1P18846 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
ATF1P18846 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.27□□□□□ -0.29
ATF1P18846 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
ATF1P18846 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
ATF1P18846 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
ATF1P18846 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.27□□□□□ -0.29
ATF1P18846 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ATF1P18846 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ATF1P18846 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ATF1P18846 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ATF1P18846 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ATF1P18846 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
ATF1P18846 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
ATF1P18846 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ATF1P18846 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
ATF1P18846 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.26□□□□□ -0.29
ATF1P18846 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ATF1P18846 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
ATF1P18846 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATF1P18846 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATF1P18846 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.26□□□□□ -0.29
ATF1P18846 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATF1P18846 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATF1P18846 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATF1P18846 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
ATF1P18846 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATF1P18846 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATF1P18846 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATF1P18846 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ATF1P18846 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
ATF1P18846 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ATF1P18846 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATF1P18846 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.26□□□□□ -0.29
ATF1P18846 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
ATF1P18846 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATF1P18846 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ATF1P18846 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
ATF1P18846 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
ATF1P18846 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATF1P18846 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATF1P18846 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.26□□□□□ -0.29
ATF1P18846 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.26□□□□□ -0.29
ATF1P18846 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.26□□□□□ -0.29
ATF1P18846 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.26□□□□□ -0.29
ATF1P18846 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ATF1P18846 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.26□□□□□ -0.29
ATF1P18846 AL354702.1-201ENST00000442006 1960 ntBASIC13.26□□□□□ -0.29
ATF1P18846 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ATF1P18846 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.26□□□□□ -0.29
ATF1P18846 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ATF1P18846 SDHAP3-202ENST00000515467 728 ntBASIC13.26□□□□□ -0.29
ATF1P18846 AC022447.6-201ENST00000515522 438 ntBASIC13.26□□□□□ -0.29
ATF1P18846 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.26□□□□□ -0.29
ATF1P18846 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.26□□□□□ -0.29
ATF1P18846 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
ATF1P18846 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.26□□□□□ -0.29
ATF1P18846 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATF1P18846 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.26□□□□□ -0.29
ATF1P18846 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.26□□□□□ -0.29
ATF1P18846 AC010336.2-201ENST00000564226 506 ntBASIC13.26□□□□□ -0.29
ATF1P18846 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
ATF1P18846 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.26□□□□□ -0.29
ATF1P18846 AC027612.4-201ENST00000605371 583 ntBASIC13.26□□□□□ -0.29
ATF1P18846 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATF1P18846 AC134684.3-201ENST00000641758 218 ntBASIC13.26□□□□□ -0.29
ATF1P18846 AL109936.8-201ENST00000641772 604 ntBASIC13.26□□□□□ -0.29
ATF1P18846 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATF1P18846 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATF1P18846 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
ATF1P18846 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
ATF1P18846 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATF1P18846 DGCR9-201ENST00000609630 2415 ntBASIC13.25□□□□□ -0.29
ATF1P18846 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATF1P18846 TCAF1P1-201ENST00000414990 2232 ntBASIC13.25□□□□□ -0.29
ATF1P18846 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.25□□□□□ -0.29
ATF1P18846 AC016397.2-201ENST00000624848 1985 ntBASIC13.25□□□□□ -0.29
ATF1P18846 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
ATF1P18846 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATF1P18846 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
ATF1P18846 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ATF1P18846 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ATF1P18846 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms