Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRAP01903 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HLA-DRAP01903 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.16■□□□□ 0.18
HLA-DRAP01903 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRAP01903 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HLA-DRAP01903 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRAP01903 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HLA-DRAP01903 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRAP01903 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
HLA-DRAP01903 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
HLA-DRAP01903 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
HLA-DRAP01903 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRAP01903 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRAP01903 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DRAP01903 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.15■□□□□ 0.18
HLA-DRAP01903 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DRAP01903 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DRAP01903 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.15■□□□□ 0.18
HLA-DRAP01903 AC011840.2-201ENST00000563063 1520 ntBASIC16.15■□□□□ 0.18
HLA-DRAP01903 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
HLA-DRAP01903 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HLA-DRAP01903 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DRAP01903 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DRAP01903 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DRAP01903 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DRAP01903 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DRAP01903 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HLA-DRAP01903 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HLA-DRAP01903 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DRAP01903 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.15■□□□□ 0.18
HLA-DRAP01903 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DRAP01903 TLE1P1-201ENST00000422965 589 ntBASIC16.15■□□□□ 0.18
HLA-DRAP01903 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.15■□□□□ 0.18
HLA-DRAP01903 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
HLA-DRAP01903 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.15■□□□□ 0.18
HLA-DRAP01903 AL391280.1-201ENST00000506969 1062 ntBASIC16.15■□□□□ 0.18
HLA-DRAP01903 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HLA-DRAP01903 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.15■□□□□ 0.18
HLA-DRAP01903 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.15■□□□□ 0.18
HLA-DRAP01903 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.15■□□□□ 0.18
HLA-DRAP01903 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HLA-DRAP01903 AL512343.1-201ENST00000605837 169 ntBASIC16.15■□□□□ 0.18
HLA-DRAP01903 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HLA-DRAP01903 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.15■□□□□ 0.18
HLA-DRAP01903 AC138951.2-201ENST00000623455 1161 ntBASIC16.15■□□□□ 0.18
HLA-DRAP01903 INE2-201ENST00000630399 1874 ntBASIC16.15■□□□□ 0.18
HLA-DRAP01903 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DRAP01903 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
HLA-DRAP01903 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DRAP01903 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DRAP01903 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.15■□□□□ 0.18
HLA-DRAP01903 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DRAP01903 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DRAP01903 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DRAP01903 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DRAP01903 FKBP4P6-201ENST00000457486 1332 ntBASIC16.15■□□□□ 0.18
HLA-DRAP01903 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DRAP01903 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DRAP01903 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
HLA-DRAP01903 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HLA-DRAP01903 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HLA-DRAP01903 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HLA-DRAP01903 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.14■□□□□ 0.18
HLA-DRAP01903 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HLA-DRAP01903 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HLA-DRAP01903 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRAP01903 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.14■□□□□ 0.17
HLA-DRAP01903 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.14■□□□□ 0.17
HLA-DRAP01903 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRAP01903 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRAP01903 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.14■□□□□ 0.17
HLA-DRAP01903 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRAP01903 LINC00552-201ENST00000625151 2579 ntBASIC16.14■□□□□ 0.17
HLA-DRAP01903 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRAP01903 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRAP01903 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRAP01903 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRAP01903 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRAP01903 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.14■□□□□ 0.17
HLA-DRAP01903 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
HLA-DRAP01903 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.14■□□□□ 0.17
HLA-DRAP01903 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.14■□□□□ 0.17
HLA-DRAP01903 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.14■□□□□ 0.17
HLA-DRAP01903 FTLP10-202ENST00000505798 471 ntBASIC16.14■□□□□ 0.17
HLA-DRAP01903 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.14■□□□□ 0.17
HLA-DRAP01903 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.14■□□□□ 0.17
HLA-DRAP01903 RAB43P1-201ENST00000561790 589 ntBASIC16.14■□□□□ 0.17
HLA-DRAP01903 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.14■□□□□ 0.17
HLA-DRAP01903 AC138696.2-201ENST00000607376 223 ntBASIC16.14■□□□□ 0.17
HLA-DRAP01903 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.14■□□□□ 0.17
HLA-DRAP01903 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRAP01903 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRAP01903 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
HLA-DRAP01903 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRAP01903 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HLA-DRAP01903 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRAP01903 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRAP01903 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRAP01903 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.14■□□□□ 0.17
HLA-DRAP01903 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms