Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC21.92■■□□□ 1.1
RAPGEF3O95398 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF3O95398 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC21.91■■□□□ 1.1
RAPGEF3O95398 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF3O95398 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF3O95398 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF3O95398 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF3O95398 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC21.91■■□□□ 1.1
RAPGEF3O95398 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF3O95398 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF3O95398 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC21.91■■□□□ 1.1
RAPGEF3O95398 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC21.91■■□□□ 1.1
RAPGEF3O95398 AC023906.1-201ENST00000486386 453 ntBASIC21.91■■□□□ 1.1
RAPGEF3O95398 RPS23-207ENST00000511844 530 ntTSL 2 BASIC21.91■■□□□ 1.1
RAPGEF3O95398 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC21.91■■□□□ 1.1
RAPGEF3O95398 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC21.91■■□□□ 1.1
RAPGEF3O95398 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC21.91■■□□□ 1.1
RAPGEF3O95398 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF3O95398 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF3O95398 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF3O95398 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC21.91■■□□□ 1.1
RAPGEF3O95398 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC21.91■■□□□ 1.1
RAPGEF3O95398 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF3O95398 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF3O95398 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF3O95398 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC21.91■■□□□ 1.1
RAPGEF3O95398 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
RAPGEF3O95398 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPGEF3O95398 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF3O95398 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC21.9■■□□□ 1.1
RAPGEF3O95398 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC21.9■■□□□ 1.1
RAPGEF3O95398 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF3O95398 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF3O95398 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.9■■□□□ 1.1
RAPGEF3O95398 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC21.9■■□□□ 1.1
RAPGEF3O95398 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF3O95398 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF3O95398 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RAPGEF3O95398 SCARNA12-201ENST00000459155 270 ntBASIC21.9■■□□□ 1.1
RAPGEF3O95398 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC21.9■■□□□ 1.1
RAPGEF3O95398 CASP3-205ENST00000517513 964 ntTSL 5 BASIC21.9■■□□□ 1.1
RAPGEF3O95398 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC21.9■■□□□ 1.1
RAPGEF3O95398 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC21.9■■□□□ 1.1
RAPGEF3O95398 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC21.9■■□□□ 1.1
RAPGEF3O95398 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC21.9■■□□□ 1.1
RAPGEF3O95398 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF3O95398 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF3O95398 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC21.9■■□□□ 1.1
RAPGEF3O95398 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF3O95398 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF3O95398 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF3O95398 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC21.89■■□□□ 1.1
RAPGEF3O95398 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RAPGEF3O95398 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC21.89■■□□□ 1.1
RAPGEF3O95398 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
RAPGEF3O95398 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RAPGEF3O95398 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
RAPGEF3O95398 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC21.89■■□□□ 1.1
RAPGEF3O95398 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RAPGEF3O95398 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RAPGEF3O95398 WASH3P-207ENST00000560956 1394 ntBASIC21.89■■□□□ 1.1
RAPGEF3O95398 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
RAPGEF3O95398 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RAPGEF3O95398 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RAPGEF3O95398 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RAPGEF3O95398 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RAPGEF3O95398 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC21.89■■□□□ 1.09
RAPGEF3O95398 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
RAPGEF3O95398 AC006529.1-201ENST00000459978 637 ntBASIC21.89■■□□□ 1.09
RAPGEF3O95398 IGHVIII-5-2-201ENST00000522505 261 ntBASIC21.89■■□□□ 1.09
RAPGEF3O95398 NAA40-205ENST00000539656 577 ntTSL 4 BASIC21.89■■□□□ 1.09
RAPGEF3O95398 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC21.89■■□□□ 1.09
RAPGEF3O95398 MT2A-202ENST00000561491 581 ntTSL 2 BASIC21.89■■□□□ 1.09
RAPGEF3O95398 AL590235.1-201ENST00000564650 861 ntBASIC21.89■■□□□ 1.09
RAPGEF3O95398 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC21.89■■□□□ 1.09
RAPGEF3O95398 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RAPGEF3O95398 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RAPGEF3O95398 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
RAPGEF3O95398 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC21.89■■□□□ 1.09
RAPGEF3O95398 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RAPGEF3O95398 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
RAPGEF3O95398 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RAPGEF3O95398 AC009093.10-201ENST00000641956 1442 ntBASIC21.89■■□□□ 1.09
RAPGEF3O95398 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RAPGEF3O95398 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RAPGEF3O95398 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAPGEF3O95398 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RAPGEF3O95398 AC090616.6-203ENST00000579186 1945 ntBASIC21.88■■□□□ 1.09
RAPGEF3O95398 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
RAPGEF3O95398 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAPGEF3O95398 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC21.88■■□□□ 1.09
RAPGEF3O95398 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RAPGEF3O95398 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAPGEF3O95398 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC21.88■■□□□ 1.09
RAPGEF3O95398 RPL3P5-201ENST00000441645 1232 ntBASIC21.88■■□□□ 1.09
RAPGEF3O95398 AL451000.1-201ENST00000451300 1186 ntBASIC21.88■■□□□ 1.09
RAPGEF3O95398 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RAPGEF3O95398 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC21.88■■□□□ 1.09
RAPGEF3O95398 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC21.88■■□□□ 1.09
RAPGEF3O95398 HINT1-205ENST00000508488 703 ntTSL 2 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms