Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
UPK1BO75841 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.11□□□□□ -0.31
UPK1BO75841 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
UPK1BO75841 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
UPK1BO75841 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
UPK1BO75841 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UPK1BO75841 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UPK1BO75841 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UPK1BO75841 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
UPK1BO75841 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UPK1BO75841 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.11□□□□□ -0.31
UPK1BO75841 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.11□□□□□ -0.31
UPK1BO75841 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC13.11□□□□□ -0.31
UPK1BO75841 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.11□□□□□ -0.31
UPK1BO75841 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UPK1BO75841 KRT18P1-202ENST00000452408 1331 ntBASIC13.11□□□□□ -0.31
UPK1BO75841 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UPK1BO75841 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.11□□□□□ -0.31
UPK1BO75841 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UPK1BO75841 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UPK1BO75841 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UPK1BO75841 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.1□□□□□ -0.31
UPK1BO75841 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
UPK1BO75841 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK1BO75841 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK1BO75841 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
UPK1BO75841 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK1BO75841 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.1□□□□□ -0.31
UPK1BO75841 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC13.1□□□□□ -0.31
UPK1BO75841 AL157996.1-201ENST00000624684 2299 ntBASIC13.1□□□□□ -0.31
UPK1BO75841 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK1BO75841 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK1BO75841 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK1BO75841 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK1BO75841 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.1□□□□□ -0.31
UPK1BO75841 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK1BO75841 MEX3B-202ENST00000558133 4333 ntBASIC13.1□□□□□ -0.31
UPK1BO75841 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
UPK1BO75841 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK1BO75841 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.1□□□□□ -0.31
UPK1BO75841 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK1BO75841 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
UPK1BO75841 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
UPK1BO75841 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.1□□□□□ -0.31
UPK1BO75841 FAM185BP-201ENST00000443595 716 ntBASIC13.1□□□□□ -0.31
UPK1BO75841 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.1□□□□□ -0.31
UPK1BO75841 AC090192.1-201ENST00000517740 490 ntBASIC13.1□□□□□ -0.31
UPK1BO75841 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
UPK1BO75841 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.1□□□□□ -0.31
UPK1BO75841 AC069148.1-201ENST00000608741 768 ntBASIC13.1□□□□□ -0.31
UPK1BO75841 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.1□□□□□ -0.31
UPK1BO75841 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.1□□□□□ -0.31
UPK1BO75841 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK1BO75841 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
UPK1BO75841 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK1BO75841 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK1BO75841 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.1□□□□□ -0.31
UPK1BO75841 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK1BO75841 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK1BO75841 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
UPK1BO75841 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.1□□□□□ -0.31
UPK1BO75841 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC13.1□□□□□ -0.31
UPK1BO75841 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC13.1□□□□□ -0.31
UPK1BO75841 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK1BO75841 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK1BO75841 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK1BO75841 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK1BO75841 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
UPK1BO75841 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.1□□□□□ -0.31
UPK1BO75841 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
UPK1BO75841 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
UPK1BO75841 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK1BO75841 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
UPK1BO75841 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK1BO75841 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.09□□□□□ -0.31
UPK1BO75841 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK1BO75841 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK1BO75841 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
UPK1BO75841 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK1BO75841 AC011840.2-201ENST00000563063 1520 ntBASIC13.09□□□□□ -0.31
UPK1BO75841 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC13.09□□□□□ -0.31
UPK1BO75841 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
UPK1BO75841 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK1BO75841 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK1BO75841 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK1BO75841 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
UPK1BO75841 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UPK1BO75841 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK1BO75841 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UPK1BO75841 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
UPK1BO75841 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK1BO75841 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK1BO75841 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
UPK1BO75841 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UPK1BO75841 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UPK1BO75841 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK1BO75841 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.09□□□□□ -0.31
UPK1BO75841 TOB2P1-201ENST00000469761 992 ntBASIC13.09□□□□□ -0.31
UPK1BO75841 DUX4L26-201ENST00000489078 1255 ntBASIC13.09□□□□□ -0.31
UPK1BO75841 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms