Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.89□□□□□ -0.35
SDCBPO00560 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.89□□□□□ -0.35
SDCBPO00560 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC12.89□□□□□ -0.35
SDCBPO00560 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC12.89□□□□□ -0.35
SDCBPO00560 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.89□□□□□ -0.35
SDCBPO00560 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.89□□□□□ -0.35
SDCBPO00560 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SDCBPO00560 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.89□□□□□ -0.35
SDCBPO00560 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.89□□□□□ -0.35
SDCBPO00560 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.89□□□□□ -0.35
SDCBPO00560 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.89□□□□□ -0.35
SDCBPO00560 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SDCBPO00560 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SDCBPO00560 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SDCBPO00560 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
SDCBPO00560 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.89□□□□□ -0.35
SDCBPO00560 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SDCBPO00560 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.89□□□□□ -0.35
SDCBPO00560 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.89□□□□□ -0.35
SDCBPO00560 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SDCBPO00560 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SDCBPO00560 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SDCBPO00560 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
SDCBPO00560 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SDCBPO00560 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
SDCBPO00560 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SDCBPO00560 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SDCBPO00560 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SDCBPO00560 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.89□□□□□ -0.35
SDCBPO00560 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
SDCBPO00560 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SDCBPO00560 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SDCBPO00560 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SDCBPO00560 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.88□□□□□ -0.35
SDCBPO00560 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.88□□□□□ -0.35
SDCBPO00560 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SDCBPO00560 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SDCBPO00560 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SDCBPO00560 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SDCBPO00560 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SDCBPO00560 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SDCBPO00560 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SDCBPO00560 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SDCBPO00560 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SDCBPO00560 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SDCBPO00560 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SDCBPO00560 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SDCBPO00560 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SDCBPO00560 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.88□□□□□ -0.35
SDCBPO00560 AC074338.1-201ENST00000416825 156 ntBASIC12.88□□□□□ -0.35
SDCBPO00560 URGCP-206ENST00000446958 365 ntTSL 2 BASIC12.88□□□□□ -0.35
SDCBPO00560 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.88□□□□□ -0.35
SDCBPO00560 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.88□□□□□ -0.35
SDCBPO00560 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SDCBPO00560 IGHV3-42-201ENST00000520410 361 ntBASIC12.88□□□□□ -0.35
SDCBPO00560 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SDCBPO00560 AL512361.1-201ENST00000554200 418 ntBASIC12.88□□□□□ -0.35
SDCBPO00560 AC051619.7-201ENST00000568314 623 ntBASIC12.88□□□□□ -0.35
SDCBPO00560 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.88□□□□□ -0.35
SDCBPO00560 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC12.88□□□□□ -0.35
SDCBPO00560 AC074044.1-201ENST00000609673 707 ntBASIC12.88□□□□□ -0.35
SDCBPO00560 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.88□□□□□ -0.35
SDCBPO00560 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.88□□□□□ -0.35
SDCBPO00560 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.88□□□□□ -0.35
SDCBPO00560 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SDCBPO00560 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SDCBPO00560 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.88□□□□□ -0.35
SDCBPO00560 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SDCBPO00560 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
SDCBPO00560 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SDCBPO00560 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.88□□□□□ -0.35
SDCBPO00560 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SDCBPO00560 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SDCBPO00560 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SDCBPO00560 AC152010.1-201ENST00000415779 2006 ntBASIC12.88□□□□□ -0.35
SDCBPO00560 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SDCBPO00560 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SDCBPO00560 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SDCBPO00560 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.88□□□□□ -0.35
SDCBPO00560 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
SDCBPO00560 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
SDCBPO00560 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SDCBPO00560 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SDCBPO00560 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SDCBPO00560 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.87□□□□□ -0.35
SDCBPO00560 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SDCBPO00560 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SDCBPO00560 AC107918.4-201ENST00000641966 3141 ntBASIC12.87□□□□□ -0.35
SDCBPO00560 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SDCBPO00560 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SDCBPO00560 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SDCBPO00560 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SDCBPO00560 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SDCBPO00560 AC138969.3-201ENST00000546612 1459 ntBASIC12.87□□□□□ -0.35
SDCBPO00560 AC138932.2-201ENST00000548268 1459 ntBASIC12.87□□□□□ -0.35
SDCBPO00560 AC126755.4-201ENST00000549796 1459 ntBASIC12.87□□□□□ -0.35
SDCBPO00560 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SDCBPO00560 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SDCBPO00560 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SDCBPO00560 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms