Protein–RNA interactions for Protein: A6NEW6

FAM90A16P, Putative protein FAM90A16P/FAM90A17P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A16PA6NEW6 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 AC134915.1-201ENST00000426461 574 ntBASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 AL442647.2-201ENST00000429864 857 ntBASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 FAM207CP-201ENST00000443486 507 ntBASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 UGT1A2P-201ENST00000454886 866 ntBASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 AC120045.2-201ENST00000567334 178 ntBASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A16PA6NEW6 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 GIMAP3P-201ENST00000495150 836 ntBASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 AC093004.1-201ENST00000508850 424 ntBASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 AC104596.2-201ENST00000512793 793 ntBASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 AC104794.3-201ENST00000566840 1248 ntBASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 MIR6074-201ENST00000612054 107 ntBASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A16PA6NEW6 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms