Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 VDAC1P1-201ENST00000439229 848 ntBASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 NOC2LP1-201ENST00000450578 752 ntBASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 IQSEC3P1-201ENST00000538799 536 ntBASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 MIR3147-201ENST00000577811 66 ntBASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 AC018635.2-201ENST00000608625 364 ntBASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 AC020910.5-201ENST00000623668 1865 ntBASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 AC244394.1-201ENST00000435000 1665 ntBASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 AL365203.3-201ENST00000609742 2057 ntBASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 REXO1L4P-201ENST00000605109 1937 ntBASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 RN7SKP230-201ENST00000365642 335 ntBASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 AC026316.1-201ENST00000398900 414 ntBASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 MIR4754-201ENST00000582477 89 ntBASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 AC103691.2-201ENST00000618824 433 ntBASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 COX6A1P2-201ENST00000620597 330 ntBASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC187A0A096LP49 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms