Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 AC087392.5-201ENST00000612517 489 ntBASIC14.9□□□□□ -0.02
NCDNQ9UBB6 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 MIR6858-201ENST00000620733 67 ntBASIC14.9□□□□□ -0.02
NCDNQ9UBB6 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 AC092299.1-201ENST00000632679 757 ntBASIC14.9□□□□□ -0.02
NCDNQ9UBB6 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.9□□□□□ -0.02
NCDNQ9UBB6 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 CLUHP2-201ENST00000426660 1303 ntBASIC14.9□□□□□ -0.02
NCDNQ9UBB6 FKBP4P6-201ENST00000457486 1332 ntBASIC14.9□□□□□ -0.02
NCDNQ9UBB6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
NCDNQ9UBB6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 AL596087.1-201ENST00000400979 1969 ntBASIC14.89□□□□□ -0.03
NCDNQ9UBB6 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 AC024909.3-201ENST00000611513 2257 ntBASIC14.89□□□□□ -0.03
NCDNQ9UBB6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 AC055811.4-201ENST00000624039 1754 ntBASIC14.89□□□□□ -0.03
NCDNQ9UBB6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 AC009955.4-201ENST00000597192 544 ntBASIC14.89□□□□□ -0.03
NCDNQ9UBB6 AC005632.3-201ENST00000605544 308 ntBASIC14.89□□□□□ -0.03
NCDNQ9UBB6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCDNQ9UBB6 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NCDNQ9UBB6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCDNQ9UBB6 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCDNQ9UBB6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCDNQ9UBB6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCDNQ9UBB6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCDNQ9UBB6 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NCDNQ9UBB6 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NCDNQ9UBB6 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.88□□□□□ -0.03
NCDNQ9UBB6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.88□□□□□ -0.03
NCDNQ9UBB6 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NCDNQ9UBB6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 159.1 ms