Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 CHCHD2P9-201ENST00000461726 456 ntBASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 TMBIM7P-202ENST00000641474 1516 ntBASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTFDC1Q9BY42 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RTFDC1Q9BY42 MROH4P-201ENST00000431302 1578 ntBASIC18■□□□□ 0.47
RTFDC1Q9BY42 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTFDC1Q9BY42 REXO1L2P-201ENST00000425429 2069 ntBASIC18■□□□□ 0.47
RTFDC1Q9BY42 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RTFDC1Q9BY42 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTFDC1Q9BY42 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTFDC1Q9BY42 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTFDC1Q9BY42 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTFDC1Q9BY42 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RTFDC1Q9BY42 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RTFDC1Q9BY42 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTFDC1Q9BY42 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC18■□□□□ 0.47
RTFDC1Q9BY42 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RTFDC1Q9BY42 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTFDC1Q9BY42 TSPY25P-201ENST00000429463 745 ntBASIC18■□□□□ 0.47
RTFDC1Q9BY42 AL627422.1-201ENST00000434104 580 ntBASIC18■□□□□ 0.47
RTFDC1Q9BY42 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC18■□□□□ 0.47
RTFDC1Q9BY42 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RTFDC1Q9BY42 BUD31-205ENST00000456893 512 ntTSL 5 BASIC18■□□□□ 0.47
RTFDC1Q9BY42 RPL18AP3-201ENST00000462885 528 ntBASIC18■□□□□ 0.47
RTFDC1Q9BY42 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC18■□□□□ 0.47
RTFDC1Q9BY42 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTFDC1Q9BY42 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC18■□□□□ 0.47
RTFDC1Q9BY42 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC18■□□□□ 0.47
RTFDC1Q9BY42 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC18■□□□□ 0.47
RTFDC1Q9BY42 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC18■□□□□ 0.47
RTFDC1Q9BY42 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTFDC1Q9BY42 MIR4522-201ENST00000584932 87 ntBASIC18■□□□□ 0.47
RTFDC1Q9BY42 MIR6858-201ENST00000620733 67 ntBASIC18■□□□□ 0.47
RTFDC1Q9BY42 AC092299.1-201ENST00000632679 757 ntBASIC18■□□□□ 0.47
RTFDC1Q9BY42 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18■□□□□ 0.47
RTFDC1Q9BY42 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTFDC1Q9BY42 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTFDC1Q9BY42 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RTFDC1Q9BY42 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTFDC1Q9BY42 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC18■□□□□ 0.47
RTFDC1Q9BY42 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTFDC1Q9BY42 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
RTFDC1Q9BY42 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTFDC1Q9BY42 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTFDC1Q9BY42 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.99■□□□□ 0.47
RTFDC1Q9BY42 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTFDC1Q9BY42 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTFDC1Q9BY42 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTFDC1Q9BY42 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RTFDC1Q9BY42 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTFDC1Q9BY42 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC17.99■□□□□ 0.47
RTFDC1Q9BY42 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RTFDC1Q9BY42 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.99■□□□□ 0.47
RTFDC1Q9BY42 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTFDC1Q9BY42 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTFDC1Q9BY42 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC17.99■□□□□ 0.47
RTFDC1Q9BY42 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTFDC1Q9BY42 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC17.99■□□□□ 0.47
RTFDC1Q9BY42 CMC2-224ENST00000630396 481 ntTSL 5 BASIC17.99■□□□□ 0.47
RTFDC1Q9BY42 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTFDC1Q9BY42 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTFDC1Q9BY42 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.99■□□□□ 0.47
RTFDC1Q9BY42 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
RTFDC1Q9BY42 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.99■□□□□ 0.47
RTFDC1Q9BY42 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTFDC1Q9BY42 KRT18P9-201ENST00000604826 1300 ntBASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTFDC1Q9BY42 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms