Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 MIR4453-201ENST00000584019 89 ntBASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 AC011467.4-201ENST00000594891 528 ntBASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 AP001059.3-201ENST00000619053 235 ntBASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TRIML2Q8N7C3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 CICP11-201ENST00000434745 2827 ntBASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 AL133267.1-201ENST00000398220 340 ntBASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 GHSR-202ENST00000427970 912 ntBASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 AC015910.1-201ENST00000579400 975 ntBASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 TCAF1P1-201ENST00000414990 2232 ntBASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms