Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
LINC00346Q8IVM7 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
LINC00346Q8IVM7 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
LINC00346Q8IVM7 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 CYMP-203ENST00000474680 1263 ntBASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 INGX-202ENST00000489074 768 ntBASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 MIR8072-201ENST00000614241 80 ntBASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 AC113367.3-201ENST00000508316 1912 ntBASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC00346Q8IVM7 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.38□□□□□ -0.27
LINC00346Q8IVM7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms