Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 AL132994.2-201ENST00000603120 687 ntBASIC16.29■□□□□ 0.2
CDC42EP1Q00587 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 PPT1-215ENST00000641471 2368 ntBASIC16.29■□□□□ 0.2
CDC42EP1Q00587 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDC42EP1Q00587 AC007292.2-201ENST00000593524 1812 ntBASIC16.29■□□□□ 0.2
CDC42EP1Q00587 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 AC244394.1-201ENST00000435000 1665 ntBASIC16.28■□□□□ 0.2
CDC42EP1Q00587 PAUPAR-201ENST00000630360 2965 ntBASIC16.28■□□□□ 0.2
CDC42EP1Q00587 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.28■□□□□ 0.2
CDC42EP1Q00587 RPL18P13-201ENST00000478088 569 ntBASIC16.28■□□□□ 0.2
CDC42EP1Q00587 HIST2H2BC-201ENST00000498492 580 ntBASIC16.28■□□□□ 0.2
CDC42EP1Q00587 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 ACTG1P17-201ENST00000558391 1119 ntBASIC16.28■□□□□ 0.2
CDC42EP1Q00587 SNORD3B-2-202ENST00000571722 791 ntBASIC16.28■□□□□ 0.2
CDC42EP1Q00587 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 AL645939.5-201ENST00000606834 243 ntBASIC16.28■□□□□ 0.2
CDC42EP1Q00587 MIR6720-201ENST00000611664 98 ntBASIC16.28■□□□□ 0.2
CDC42EP1Q00587 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.28■□□□□ 0.2
CDC42EP1Q00587 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC42EP1Q00587 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42EP1Q00587 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42EP1Q00587 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.27■□□□□ 0.2
CDC42EP1Q00587 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42EP1Q00587 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42EP1Q00587 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42EP1Q00587 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42EP1Q00587 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42EP1Q00587 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42EP1Q00587 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42EP1Q00587 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42EP1Q00587 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42EP1Q00587 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42EP1Q00587 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.27■□□□□ 0.2
CDC42EP1Q00587 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42EP1Q00587 HLA-J-204ENST00000495278 958 ntBASIC16.27■□□□□ 0.2
CDC42EP1Q00587 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.27■□□□□ 0.2
CDC42EP1Q00587 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42EP1Q00587 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CDC42EP1Q00587 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
CDC42EP1Q00587 AC106872.11-201ENST00000605838 421 ntBASIC16.27■□□□□ 0.2
CDC42EP1Q00587 AC026740.1-201ENST00000607068 791 ntBASIC16.27■□□□□ 0.2
CDC42EP1Q00587 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC42EP1Q00587 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.27■□□□□ 0.2
CDC42EP1Q00587 AL805961.1-203ENST00000641078 1258 ntBASIC16.27■□□□□ 0.2
CDC42EP1Q00587 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.27■□□□□ 0.19
CDC42EP1Q00587 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDC42EP1Q00587 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDC42EP1Q00587 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms