Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
CKS1BP61024 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC10.68□□□□□ -0.7
CKS1BP61024 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC10.68□□□□□ -0.7
CKS1BP61024 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 SLC35A4-201ENST00000323146 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC10.68□□□□□ -0.7
CKS1BP61024 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC10.68□□□□□ -0.7
CKS1BP61024 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
CKS1BP61024 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC10.68□□□□□ -0.7
CKS1BP61024 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC10.68□□□□□ -0.7
CKS1BP61024 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC10.68□□□□□ -0.7
CKS1BP61024 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
CKS1BP61024 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC10.68□□□□□ -0.7
CKS1BP61024 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC10.68□□□□□ -0.7
CKS1BP61024 NMU-203ENST00000507338 658 ntTSL 3 BASIC10.68□□□□□ -0.7
CKS1BP61024 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC10.68□□□□□ -0.7
CKS1BP61024 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC10.68□□□□□ -0.7
CKS1BP61024 SDHD-206ENST00000528182 754 ntTSL 3 BASIC10.68□□□□□ -0.7
CKS1BP61024 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
CKS1BP61024 AC109635.5-201ENST00000533593 962 ntBASIC10.68□□□□□ -0.7
CKS1BP61024 AC243562.2-201ENST00000561247 970 ntBASIC10.68□□□□□ -0.7
CKS1BP61024 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
CKS1BP61024 AL009183.1-201ENST00000603760 355 ntBASIC10.68□□□□□ -0.7
CKS1BP61024 IFNL4P1-201ENST00000607083 540 ntBASIC10.68□□□□□ -0.7
CKS1BP61024 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
CKS1BP61024 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC10.68□□□□□ -0.7
CKS1BP61024 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC10.68□□□□□ -0.7
CKS1BP61024 AC007064.4-201ENST00000637740 555 ntBASIC10.68□□□□□ -0.7
CKS1BP61024 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC10.68□□□□□ -0.7
CKS1BP61024 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
CKS1BP61024 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC10.68□□□□□ -0.7
CKS1BP61024 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
CKS1BP61024 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC10.68□□□□□ -0.7
CKS1BP61024 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
CKS1BP61024 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC10.68□□□□□ -0.7
CKS1BP61024 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
CKS1BP61024 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
CKS1BP61024 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 ILF3-AS1-201ENST00000591501 1983 ntBASIC10.68□□□□□ -0.7
CKS1BP61024 AC134407.2-201ENST00000625089 1978 ntBASIC10.68□□□□□ -0.7
CKS1BP61024 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC10.68□□□□□ -0.7
CKS1BP61024 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
CKS1BP61024 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC10.68□□□□□ -0.7
CKS1BP61024 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CKS1BP61024 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
CKS1BP61024 WASH6P-202ENST00000359512 1437 ntBASIC10.67□□□□□ -0.7
CKS1BP61024 AC073439.1-201ENST00000624121 1774 ntBASIC10.67□□□□□ -0.7
CKS1BP61024 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
CKS1BP61024 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC10.67□□□□□ -0.7
CKS1BP61024 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
CKS1BP61024 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC10.67□□□□□ -0.7
CKS1BP61024 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
CKS1BP61024 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC10.67□□□□□ -0.7
CKS1BP61024 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
CKS1BP61024 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC10.67□□□□□ -0.7
CKS1BP61024 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
CKS1BP61024 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CKS1BP61024 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
CKS1BP61024 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CKS1BP61024 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC10.67□□□□□ -0.7
CKS1BP61024 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CKS1BP61024 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC10.67□□□□□ -0.7
CKS1BP61024 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC10.67□□□□□ -0.7
CKS1BP61024 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC10.67□□□□□ -0.7
CKS1BP61024 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
CKS1BP61024 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC10.67□□□□□ -0.7
CKS1BP61024 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC10.67□□□□□ -0.7
CKS1BP61024 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
CKS1BP61024 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC10.67□□□□□ -0.7
CKS1BP61024 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 592 ms