Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.47□□□□□ -0.09
VSX2P58304 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 CNN2P8-201ENST00000421872 913 ntBASIC14.47□□□□□ -0.09
VSX2P58304 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 RNA5SP486-201ENST00000515961 83 ntBASIC14.47□□□□□ -0.09
VSX2P58304 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.47□□□□□ -0.09
VSX2P58304 AC078819.1-201ENST00000547454 765 ntBASIC14.47□□□□□ -0.09
VSX2P58304 AC012085.1-201ENST00000548270 765 ntBASIC14.47□□□□□ -0.09
VSX2P58304 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.47□□□□□ -0.09
VSX2P58304 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.47□□□□□ -0.09
VSX2P58304 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.47□□□□□ -0.09
VSX2P58304 RN7SL48P-201ENST00000579283 293 ntBASIC14.47□□□□□ -0.09
VSX2P58304 ENPP7P14-201ENST00000621765 1040 ntBASIC14.47□□□□□ -0.09
VSX2P58304 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.47□□□□□ -0.09
VSX2P58304 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 FAM45BP-202ENST00000592932 1624 ntBASIC14.47□□□□□ -0.09
VSX2P58304 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.47□□□□□ -0.09
VSX2P58304 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 SNX18-202ENST00000343017 3140 ntBASIC14.47□□□□□ -0.09
VSX2P58304 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 AC006486.2-201ENST00000624246 2199 ntBASIC14.47□□□□□ -0.09
VSX2P58304 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.47□□□□□ -0.09
VSX2P58304 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.47□□□□□ -0.09
VSX2P58304 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.47□□□□□ -0.09
VSX2P58304 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
VSX2P58304 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
VSX2P58304 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.47□□□□□ -0.09
VSX2P58304 LILRP1-201ENST00000444199 1370 ntBASIC14.47□□□□□ -0.09
VSX2P58304 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.47□□□□□ -0.09
VSX2P58304 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
VSX2P58304 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
VSX2P58304 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.46□□□□□ -0.09
VSX2P58304 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.46□□□□□ -0.09
VSX2P58304 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VSX2P58304 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
VSX2P58304 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
VSX2P58304 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VSX2P58304 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.46□□□□□ -0.09
VSX2P58304 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VSX2P58304 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.46□□□□□ -0.09
VSX2P58304 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.46□□□□□ -0.09
VSX2P58304 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VSX2P58304 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VSX2P58304 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.46□□□□□ -0.09
VSX2P58304 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VSX2P58304 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VSX2P58304 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VSX2P58304 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.46□□□□□ -0.09
VSX2P58304 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.46□□□□□ -0.09
VSX2P58304 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
VSX2P58304 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.46□□□□□ -0.09
VSX2P58304 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.46□□□□□ -0.09
VSX2P58304 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VSX2P58304 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VSX2P58304 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.46□□□□□ -0.09
VSX2P58304 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.46□□□□□ -0.09
VSX2P58304 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.46□□□□□ -0.09
VSX2P58304 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.46□□□□□ -0.09
VSX2P58304 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VSX2P58304 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VSX2P58304 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.46□□□□□ -0.09
VSX2P58304 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VSX2P58304 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VSX2P58304 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VSX2P58304 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.46□□□□□ -0.09
VSX2P58304 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.46□□□□□ -0.09
VSX2P58304 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
VSX2P58304 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
VSX2P58304 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
VSX2P58304 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
VSX2P58304 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.46□□□□□ -0.1
VSX2P58304 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VSX2P58304 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.46□□□□□ -0.1
VSX2P58304 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
VSX2P58304 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
VSX2P58304 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VSX2P58304 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
VSX2P58304 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
VSX2P58304 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VSX2P58304 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.45□□□□□ -0.1
VSX2P58304 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
VSX2P58304 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
VSX2P58304 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
VSX2P58304 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VSX2P58304 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
VSX2P58304 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
VSX2P58304 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VSX2P58304 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.45□□□□□ -0.1
VSX2P58304 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms