Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC12.59□□□□□ -0.39
RIPPLY3P57055 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
RIPPLY3P57055 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
RIPPLY3P57055 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
RIPPLY3P57055 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.58□□□□□ -0.39
RIPPLY3P57055 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
RIPPLY3P57055 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
RIPPLY3P57055 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
RIPPLY3P57055 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
RIPPLY3P57055 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
RIPPLY3P57055 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
RIPPLY3P57055 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RIPPLY3P57055 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RIPPLY3P57055 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RIPPLY3P57055 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RIPPLY3P57055 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RIPPLY3P57055 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
RIPPLY3P57055 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC12.58□□□□□ -0.4
RIPPLY3P57055 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
RIPPLY3P57055 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RIPPLY3P57055 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
RIPPLY3P57055 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RIPPLY3P57055 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RIPPLY3P57055 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
RIPPLY3P57055 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RIPPLY3P57055 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.58□□□□□ -0.4
RIPPLY3P57055 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.58□□□□□ -0.4
RIPPLY3P57055 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.58□□□□□ -0.4
RIPPLY3P57055 TOMM22P5-201ENST00000416399 439 ntBASIC12.58□□□□□ -0.4
RIPPLY3P57055 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
RIPPLY3P57055 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC12.58□□□□□ -0.4
RIPPLY3P57055 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
RIPPLY3P57055 BCL2L12P1-201ENST00000508390 733 ntBASIC12.58□□□□□ -0.4
RIPPLY3P57055 POU5F1P2-201ENST00000521750 823 ntBASIC12.58□□□□□ -0.4
RIPPLY3P57055 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
RIPPLY3P57055 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RIPPLY3P57055 AC142086.5-202ENST00000562500 217 ntBASIC12.58□□□□□ -0.4
RIPPLY3P57055 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC12.58□□□□□ -0.4
RIPPLY3P57055 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.58□□□□□ -0.4
RIPPLY3P57055 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC12.58□□□□□ -0.4
RIPPLY3P57055 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.58□□□□□ -0.4
RIPPLY3P57055 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC12.58□□□□□ -0.4
RIPPLY3P57055 RN7SL713P-201ENST00000582127 302 ntBASIC12.58□□□□□ -0.4
RIPPLY3P57055 KRT8P49-201ENST00000604166 1432 ntBASIC12.58□□□□□ -0.4
RIPPLY3P57055 AC087392.5-201ENST00000612517 489 ntBASIC12.58□□□□□ -0.4
RIPPLY3P57055 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RIPPLY3P57055 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RIPPLY3P57055 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
RIPPLY3P57055 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.58□□□□□ -0.4
RIPPLY3P57055 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RIPPLY3P57055 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RIPPLY3P57055 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.58□□□□□ -0.4
RIPPLY3P57055 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RIPPLY3P57055 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RIPPLY3P57055 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RIPPLY3P57055 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RIPPLY3P57055 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
RIPPLY3P57055 AL589702.1-201ENST00000641229 1509 ntBASIC12.57□□□□□ -0.4
RIPPLY3P57055 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
RIPPLY3P57055 AL021920.2-201ENST00000624828 1351 ntBASIC12.57□□□□□ -0.4
RIPPLY3P57055 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.57□□□□□ -0.4
RIPPLY3P57055 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RIPPLY3P57055 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RIPPLY3P57055 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RIPPLY3P57055 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC12.57□□□□□ -0.4
RIPPLY3P57055 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RIPPLY3P57055 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RIPPLY3P57055 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
RIPPLY3P57055 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
RIPPLY3P57055 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.57□□□□□ -0.4
RIPPLY3P57055 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RIPPLY3P57055 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RIPPLY3P57055 AC016396.2-201ENST00000562575 1417 ntBASIC12.57□□□□□ -0.4
RIPPLY3P57055 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RIPPLY3P57055 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
RIPPLY3P57055 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RIPPLY3P57055 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.57□□□□□ -0.4
RIPPLY3P57055 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RIPPLY3P57055 AC026410.1-201ENST00000507366 1101 ntBASIC12.57□□□□□ -0.4
RIPPLY3P57055 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC12.57□□□□□ -0.4
RIPPLY3P57055 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
RIPPLY3P57055 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC12.57□□□□□ -0.4
RIPPLY3P57055 MIR4640-201ENST00000581824 90 ntBASIC12.57□□□□□ -0.4
RIPPLY3P57055 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.57□□□□□ -0.4
RIPPLY3P57055 ECM1P1-201ENST00000604092 1279 ntBASIC12.57□□□□□ -0.4
RIPPLY3P57055 AC006548.2-201ENST00000605217 529 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms